Protein–RNA interactions for Protein: A0A0A6YXN4

Ighv1-18, Immunoglobulin heavy variable V1-18 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-18A0A0A6YXN4 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Arih1-207ENSMUST00000171975 6971 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14.29□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Ighv1-18A0A0A6YXN4 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.27□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.27□□□□□ -0.12
Ighv1-18A0A0A6YXN4 Gm13148-201ENSMUST00000118892 745 ntBASIC14.27□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-18A0A0A6YXN4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.27□□□□□ -0.13
Ighv1-18A0A0A6YXN4 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC14.27□□□□□ -0.13
Ighv1-18A0A0A6YXN4 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC14.27□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC14.27□□□□□ -0.13
Ighv1-18A0A0A6YXN4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC14.27□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Gm12441-201ENSMUST00000121806 588 ntBASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 CT025689.6-201ENSMUST00000224991 1104 ntBASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Ighv1-18A0A0A6YXN4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms