Protein–RNA interactions for Protein: A0A0A6YX06

Trbv21, T cell receptor beta, variable 21 (Fragment), mousemouse

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv21A0A0A6YX06 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 Gm27275-201ENSMUST00000184318 272 ntBASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Trbv21A0A0A6YX06 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv21A0A0A6YX06 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv21A0A0A6YX06 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv21A0A0A6YX06 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv21A0A0A6YX06 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Trbv21A0A0A6YX06 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Trbv21A0A0A6YX06 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.29■□□□□ 0.2
Trbv21A0A0A6YX06 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv21A0A0A6YX06 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv21A0A0A6YX06 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv21A0A0A6YX06 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv21A0A0A6YX06 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC16.29■□□□□ 0.2
Trbv21A0A0A6YX06 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv21A0A0A6YX06 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Trbv21A0A0A6YX06 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Gm12527-201ENSMUST00000117967 564 ntBASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Gm6576-201ENSMUST00000169678 883 ntBASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Gm45609-204ENSMUST00000209837 1207 ntTSL 5 BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 AC166341.7-201ENSMUST00000221698 126 ntBASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Trbv21A0A0A6YX06 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 Gm18025-201ENSMUST00000221733 862 ntBASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv21A0A0A6YX06 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv21A0A0A6YX06 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.27■□□□□ 0.19
Trbv21A0A0A6YX06 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv21A0A0A6YX06 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv21A0A0A6YX06 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv21A0A0A6YX06 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.27■□□□□ 0.19
Trbv21A0A0A6YX06 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv21A0A0A6YX06 Gm5898-201ENSMUST00000121016 2071 ntBASIC16.26■□□□□ 0.19
Trbv21A0A0A6YX06 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Trbv21A0A0A6YX06 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv21A0A0A6YX06 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv21A0A0A6YX06 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv21A0A0A6YX06 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv21A0A0A6YX06 Gm37856-201ENSMUST00000191634 999 ntBASIC16.26■□□□□ 0.19
Trbv21A0A0A6YX06 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC16.26■□□□□ 0.19
Trbv21A0A0A6YX06 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv21A0A0A6YX06 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv21A0A0A6YX06 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv21A0A0A6YX06 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv21A0A0A6YX06 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.26■□□□□ 0.19
Trbv21A0A0A6YX06 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv21A0A0A6YX06 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms