Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav18A0A075B656 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav18A0A075B656 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav18A0A075B656 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav18A0A075B656 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav18A0A075B656 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav18A0A075B656 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.42□□□□□ -0.1
Trav18A0A075B656 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav18A0A075B656 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trav18A0A075B656 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav18A0A075B656 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav18A0A075B656 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Trav18A0A075B656 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav18A0A075B656 Gm43338-201ENSMUST00000198617 2223 ntBASIC14.42□□□□□ -0.1
Trav18A0A075B656 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trav18A0A075B656 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav18A0A075B656 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trav18A0A075B656 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Trav18A0A075B656 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav18A0A075B656 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.41□□□□□ -0.1
Trav18A0A075B656 Gm10849-201ENSMUST00000100397 618 ntBASIC14.41□□□□□ -0.1
Trav18A0A075B656 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav18A0A075B656 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav18A0A075B656 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav18A0A075B656 Gm42569-201ENSMUST00000200539 472 ntBASIC14.41□□□□□ -0.1
Trav18A0A075B656 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trav18A0A075B656 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trav18A0A075B656 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav18A0A075B656 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav18A0A075B656 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trav18A0A075B656 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Gm2399-201ENSMUST00000104944 225 ntBASIC14.4□□□□□ -0.1
Trav18A0A075B656 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Gm18284-201ENSMUST00000172604 624 ntBASIC14.4□□□□□ -0.1
Trav18A0A075B656 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav18A0A075B656 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav18A0A075B656 Pou2f2-201ENSMUST00000098679 2340 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Trav18A0A075B656 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav18A0A075B656 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Gm7290-201ENSMUST00000104990 617 ntBASIC14.38□□□□□ -0.11
Trav18A0A075B656 Gm12918-201ENSMUST00000120234 636 ntBASIC14.38□□□□□ -0.11
Trav18A0A075B656 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Gm15710-201ENSMUST00000121821 636 ntBASIC14.38□□□□□ -0.11
Trav18A0A075B656 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Gm38285-201ENSMUST00000192928 922 ntBASIC14.38□□□□□ -0.11
Trav18A0A075B656 Gm5075-201ENSMUST00000196916 622 ntBASIC14.38□□□□□ -0.11
Trav18A0A075B656 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
Trav18A0A075B656 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms