Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav17A0A075B655 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trav17A0A075B655 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav17A0A075B655 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
Trav17A0A075B655 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trav17A0A075B655 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav17A0A075B655 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trav17A0A075B655 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trav17A0A075B655 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav17A0A075B655 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav17A0A075B655 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Trav17A0A075B655 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.02□□□□□ -0.17
Trav17A0A075B655 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav17A0A075B655 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav17A0A075B655 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.02□□□□□ -0.17
Trav17A0A075B655 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trav17A0A075B655 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav17A0A075B655 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.01□□□□□ -0.17
Trav17A0A075B655 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Ccdc85b-201ENSMUST00000179549 609 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trav17A0A075B655 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav17A0A075B655 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Trav17A0A075B655 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav17A0A075B655 AC131586.2-201ENSMUST00000228370 1512 ntBASIC14□□□□□ -0.17
Trav17A0A075B655 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav17A0A075B655 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14□□□□□ -0.17
Trav17A0A075B655 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav17A0A075B655 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav17A0A075B655 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav17A0A075B655 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Trav17A0A075B655 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav17A0A075B655 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav17A0A075B655 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Trav17A0A075B655 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC14□□□□□ -0.17
Trav17A0A075B655 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
Trav17A0A075B655 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14□□□□□ -0.17
Trav17A0A075B655 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav17A0A075B655 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav17A0A075B655 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14□□□□□ -0.17
Trav17A0A075B655 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav17A0A075B655 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav17A0A075B655 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC14□□□□□ -0.17
Trav17A0A075B655 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14□□□□□ -0.17
Trav17A0A075B655 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav17A0A075B655 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Trav17A0A075B655 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav17A0A075B655 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trav17A0A075B655 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav17A0A075B655 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Trav17A0A075B655 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav17A0A075B655 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC13.99□□□□□ -0.17
Trav17A0A075B655 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav17A0A075B655 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav17A0A075B655 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav17A0A075B655 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Trav17A0A075B655 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav17A0A075B655 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav17A0A075B655 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.99□□□□□ -0.17
Trav17A0A075B655 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Trav17A0A075B655 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
Trav17A0A075B655 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Trav17A0A075B655 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.97□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms