Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Trav5-1A0A075B5Z7 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 AC135963.1-201ENSMUST00000211640 717 ntBASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 Fst-202ENSMUST00000223640 2612 ntBASIC15.13■□□□□ 0.01
Trav5-1A0A075B5Z7 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Cacng4-201ENSMUST00000021066 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Mir7071-201ENSMUST00000184847 69 ntBASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm30025-201ENSMUST00000218555 728 ntBASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Trav5-1A0A075B5Z7 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Trav5-1A0A075B5Z7 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Dmtn-210ENSMUST00000228824 2377 ntBASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm27463-201ENSMUST00000183569 57 ntBASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Otx2os1-204ENSMUST00000227221 751 ntBASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Idnk-204ENSMUST00000226010 1898 ntBASIC15.1■□□□□ 0.01
Trav5-1A0A075B5Z7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms