Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm25332-201ENSMUST00000158038 105 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm23179-201ENSMUST00000158693 304 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm6647-201ENSMUST00000170514 641 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm28763-201ENSMUST00000188870 166 ntTSL 5 BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm29579-201ENSMUST00000190820 166 ntTSL 5 BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm36983-201ENSMUST00000192280 1102 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm43574-201ENSMUST00000196226 809 ntTSL 3 BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm45498-201ENSMUST00000210346 283 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Olfr928-ps1-201ENSMUST00000213313 237 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Mup15-201ENSMUST00000095049 925 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Rgs17-202ENSMUST00000064225 8191 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Nexn-212ENSMUST00000199470 2392 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm34885-201ENSMUST00000217440 4070 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm25096-201ENSMUST00000104043 129 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm3020-201ENSMUST00000112801 450 ntTSL 5 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm11877-201ENSMUST00000118921 852 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm13132-201ENSMUST00000121194 472 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm13232-201ENSMUST00000121816 632 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm15537-201ENSMUST00000126677 485 ntTSL 2 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm16259-201ENSMUST00000145241 553 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm24931-201ENSMUST00000158324 107 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Has2os-203ENSMUST00000165880 638 ntTSL 2 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Vmn1r-ps71-201ENSMUST00000172648 924 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm28097-201ENSMUST00000187333 366 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm43524-201ENSMUST00000197278 298 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm44171-201ENSMUST00000203701 2109 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm44523-201ENSMUST00000205616 417 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm2607-201ENSMUST00000212389 627 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm31786-202ENSMUST00000212428 676 ntTSL 3 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm45710-201ENSMUST00000212847 215 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 1700025K04Rik-201ENSMUST00000218075 1174 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Nxf3-201ENSMUST00000080929 2978 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm10330-201ENSMUST00000072014 1354 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.47□□□□□ -1.69
Trim3Q9R1R2 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Cldn34d-201ENSMUST00000114054 1003 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm15297-201ENSMUST00000117795 290 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm12287-201ENSMUST00000119770 707 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm11448-201ENSMUST00000120427 450 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm24441-201ENSMUST00000157235 281 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm23673-201ENSMUST00000157474 298 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm23513-201ENSMUST00000158181 133 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm16134-201ENSMUST00000161714 336 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm16318-201ENSMUST00000162402 601 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 V1rg10-201ENSMUST00000183378 937 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Mir7056-201ENSMUST00000183776 59 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm28129-201ENSMUST00000186273 537 ntTSL 5 BASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm28060-201ENSMUST00000191554 189 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm36986-201ENSMUST00000195320 353 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 D030025E07Rik-204ENSMUST00000198275 653 ntTSL 3 BASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm2622-201ENSMUST00000200018 471 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm43794-201ENSMUST00000200971 692 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm4714-201ENSMUST00000203395 279 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm45200-201ENSMUST00000207434 919 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm4574-201ENSMUST00000207804 542 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 Gm29785-201ENSMUST00000217033 383 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 AC132384.6-201ENSMUST00000218976 1206 ntBASIC4.46□□□□□ -1.7
Trim3Q9R1R2 AC117240.2-201ENSMUST00000220921 263 ntBASIC4.46□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms