Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm22819-201ENSMUST00000157445 303 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm17066-202ENSMUST00000165350 1113 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm22923-201ENSMUST00000174952 110 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm4791-201ENSMUST00000178065 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm6214-201ENSMUST00000178845 541 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm28514-201ENSMUST00000187488 450 ntTSL 2 BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm37636-201ENSMUST00000193583 359 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm36986-201ENSMUST00000195320 353 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm43350-201ENSMUST00000196382 711 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm43919-201ENSMUST00000204303 364 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 4930405G09Rik-201ENSMUST00000207912 1060 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm17779-201ENSMUST00000213395 394 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 AC115034.1-201ENSMUST00000215393 3846 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 AC156632.1-201ENSMUST00000220626 3845 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 AC121804.2-201ENSMUST00000222531 316 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 AC131745.1-201ENSMUST00000223660 330 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Apcs-201ENSMUST00000027824 971 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Olfr774-201ENSMUST00000097164 939 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm44860-201ENSMUST00000208473 2346 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm44567-201ENSMUST00000205645 2631 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Olfr1472-202ENSMUST00000096201 1377 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm43528-201ENSMUST00000199492 1674 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Elavl4-206ENSMUST00000106601 3775 ntAPPRIS ALT1 TSL 5 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Defb47-201ENSMUST00000100492 359 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Igkc-201ENSMUST00000103410 532 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm24124-201ENSMUST00000104103 132 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm22870-201ENSMUST00000157501 112 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm24188-201ENSMUST00000157980 108 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm16318-201ENSMUST00000162402 601 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Cldn34c1-206ENSMUST00000169445 705 ntAPPRIS P3 TSL 5 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Mir6971-201ENSMUST00000183497 63 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm37223-202ENSMUST00000193592 490 ntTSL 3 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm18752-202ENSMUST00000193627 587 ntTSL 3 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm43586-201ENSMUST00000195948 310 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm43018-201ENSMUST00000198075 1275 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm43144-201ENSMUST00000198256 485 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm43028-201ENSMUST00000202561 481 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm32308-201ENSMUST00000203053 280 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm22220-201ENSMUST00000082671 149 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Lima1Q9ERG0 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC4.42□□□□□ -1.7
Lima1Q9ERG0 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Vmn1r43-203ENSMUST00000226741 12542 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Neb-202ENSMUST00000036934 22489 ntAPPRIS P2 TSL 5 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Olfr1309-206ENSMUST00000217452 5257 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm44542-201ENSMUST00000208677 4314 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Arhgap18-201ENSMUST00000039557 3651 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm32444-201ENSMUST00000195147 3511 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 n-R5s82-201ENSMUST00000104213 109 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm12231-201ENSMUST00000119447 695 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm13815-201ENSMUST00000119963 412 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gmfg-ps-201ENSMUST00000121071 427 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm24628-201ENSMUST00000122761 289 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm23171-201ENSMUST00000157159 264 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Mir1946b-201ENSMUST00000157853 133 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm17060-201ENSMUST00000172394 824 ntBASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm3453-202ENSMUST00000178308 618 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Lima1Q9ERG0 Gm3127-203ENSMUST00000178386 618 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms