Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
Cdc40Q9DC48 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Mysm1-201ENSMUST00000075872 7420 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Vmn1r47-203ENSMUST00000227811 6792 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm25537-201ENSMUST00000103851 109 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 4933400A11Rik-203ENSMUST00000112102 1101 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm14788-201ENSMUST00000119457 375 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm12041-201ENSMUST00000121606 602 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm7840-201ENSMUST00000122086 533 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm25714-201ENSMUST00000158626 296 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Klrb1a-202ENSMUST00000171306 989 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm26828-201ENSMUST00000180640 172 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm21856-201ENSMUST00000187547 696 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 1700010I02Rik-201ENSMUST00000187729 438 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm21735-201ENSMUST00000190360 696 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm29552-201ENSMUST00000190548 660 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm6546-201ENSMUST00000192096 766 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm43044-201ENSMUST00000198091 379 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm18330-201ENSMUST00000199246 547 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm42666-201ENSMUST00000201954 152 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 AC161456.1-201ENSMUST00000206771 887 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 AC122508.1-201ENSMUST00000218365 233 ntTSL 5 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 CR974592.1-201ENSMUST00000220422 574 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm46369-201ENSMUST00000221577 401 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 AC105407.3-201ENSMUST00000224161 648 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 AC158955.1-201ENSMUST00000227140 385 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm7117-201ENSMUST00000071515 387 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Mir338-201ENSMUST00000083666 98 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Olfr547-201ENSMUST00000098229 936 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.36□□□□□ -1.71
Cdc40Q9DC48 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm43648-201ENSMUST00000197775 2485 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm37749-201ENSMUST00000193917 1899 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm43844-201ENSMUST00000202926 5605 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm43654-201ENSMUST00000200664 3417 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm12638-201ENSMUST00000119531 298 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm15745-201ENSMUST00000119807 115 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm26034-201ENSMUST00000158154 116 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm22383-201ENSMUST00000158188 327 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm26352-201ENSMUST00000158223 125 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm25605-201ENSMUST00000158364 124 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm16566-201ENSMUST00000160387 910 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Obox4-ps9-201ENSMUST00000176927 1136 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Vmn1r-ps52-201ENSMUST00000177426 862 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Vmn2r-ps23-201ENSMUST00000178719 571 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm9443-201ENSMUST00000188406 816 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm28389-201ENSMUST00000190090 697 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm37908-201ENSMUST00000195828 470 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm42643-201ENSMUST00000200504 279 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 AC162376.1-201ENSMUST00000220120 435 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 AC154623.1-201ENSMUST00000224348 805 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 AC107369.1-201ENSMUST00000227373 860 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Gm22155-201ENSMUST00000083836 162 ntBASIC4.35□□□□□ -1.71
Cdc40Q9DC48 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Cdc40Q9DC48 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.35□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 95.2 ms