Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm23511-201ENSMUST00000083084 164 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm7995-201ENSMUST00000089789 429 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Olfr1406-203ENSMUST00000215878 3149 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm37370-201ENSMUST00000191996 1410 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm11674-201ENSMUST00000124855 3005 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Ktn1-221ENSMUST00000190535 4112 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm16041-201ENSMUST00000144339 3725 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 5430403G16Rik-201ENSMUST00000092720 3341 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Cep57l1-201ENSMUST00000019951 2177 ntAPPRIS ALT2 TSL 5 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Ttc39d-201ENSMUST00000053168 2022 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm26300-201ENSMUST00000102282 94 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm22592-201ENSMUST00000104242 131 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm13103-202ENSMUST00000105768 994 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm13681-201ENSMUST00000117925 210 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm5381-201ENSMUST00000117975 1250 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm15854-201ENSMUST00000118879 808 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm13603-201ENSMUST00000119404 83 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 4930402H24Rik-203ENSMUST00000119422 3815 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm12244-201ENSMUST00000119500 291 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm13902-201ENSMUST00000120168 605 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm14238-201ENSMUST00000120227 323 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm14831-201ENSMUST00000120253 409 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm26424-201ENSMUST00000122530 104 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Cyp3a25-202ENSMUST00000138870 513 ntTSL 3 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm9785-202ENSMUST00000144563 593 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm23030-201ENSMUST00000158004 273 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm22518-201ENSMUST00000158267 68 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm6808-201ENSMUST00000162341 807 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Fabp7-202ENSMUST00000165013 880 ntTSL 2 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Spanxn4-201ENSMUST00000172433 424 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm22776-201ENSMUST00000178634 94 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm23767-201ENSMUST00000179278 94 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm27781-201ENSMUST00000185185 92 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm29556-201ENSMUST00000187591 696 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm18969-201ENSMUST00000189423 730 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm29038-201ENSMUST00000191543 678 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm43675-201ENSMUST00000199468 1184 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm43596-201ENSMUST00000202818 884 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm44134-201ENSMUST00000203064 661 ntTSL 2 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm29781-201ENSMUST00000203862 478 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm44727-201ENSMUST00000204225 451 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm18789-201ENSMUST00000216115 550 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 AC137117.1-201ENSMUST00000226912 441 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Rpl27a-ps2-201ENSMUST00000080234 450 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm23927-201ENSMUST00000082466 215 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm22456-201ENSMUST00000082578 125 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm19335-201ENSMUST00000195836 2069 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Ctsm-202ENSMUST00000223778 1905 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm2912-201ENSMUST00000223472 1799 ntTSL 5 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Olfr1318-205ENSMUST00000217533 3747 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Ccar1-201ENSMUST00000020268 4352 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm44424-201ENSMUST00000203438 1826 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Gm43990-201ENSMUST00000203790 1691 ntBASIC5.69□□□□□ -1.5
Ddx56Q9D0R4 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Nat2-201ENSMUST00000093470 1396 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm5942-201ENSMUST00000120046 439 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm11623-201ENSMUST00000120176 1225 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm11835-201ENSMUST00000120635 663 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm15157-201ENSMUST00000121852 702 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm24380-201ENSMUST00000122696 324 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm22794-201ENSMUST00000157228 306 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm25430-201ENSMUST00000157614 289 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm7316-201ENSMUST00000165395 445 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm9890-201ENSMUST00000171867 537 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Vmn1r14-201ENSMUST00000177435 912 ntAPPRIS P2 BASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm6055-201ENSMUST00000180532 378 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm8403-201ENSMUST00000189712 1298 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 Gm42958-201ENSMUST00000197595 318 ntBASIC5.68□□□□□ -1.5
Ddx56Q9D0R4 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC5.68□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms