Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm36936-201ENSMUST00000194508 2749 ntBASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Mef2c-212ENSMUST00000197146 6088 ntTSL 1 (best) BASIC6.7□□□□□ -1.34
Trim11Q99PQ2 Gm21693-202ENSMUST00000186047 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm3376-202ENSMUST00000186140 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm21704-202ENSMUST00000187277 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm10352-202ENSMUST00000187842 1576 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm21677-202ENSMUST00000189592 1576 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Vmn1r11-203ENSMUST00000228235 2376 ntAPPRIS ALT2 BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm42645-201ENSMUST00000201573 1627 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Toporsl-202ENSMUST00000107671 2699 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm42510-201ENSMUST00000196470 2258 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 AC154682.1-201ENSMUST00000225871 3124 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 AC120375.2-201ENSMUST00000226532 1853 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Olfr698-202ENSMUST00000214306 4006 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Mir467h-201ENSMUST00000116759 121 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm14918-201ENSMUST00000118153 268 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm12713-201ENSMUST00000118404 764 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm6884-201ENSMUST00000119318 615 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm14785-201ENSMUST00000120185 539 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm15801-201ENSMUST00000120920 522 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm14970-201ENSMUST00000122289 355 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm15511-201ENSMUST00000152570 557 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm8783-201ENSMUST00000159764 522 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Smim9-203ENSMUST00000165080 414 ntAPPRIS P1 TSL 3 BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm23619-201ENSMUST00000178411 94 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm25474-201ENSMUST00000179052 94 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm22047-201ENSMUST00000179176 94 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm27006-201ENSMUST00000182218 943 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Mir3473f-201ENSMUST00000183743 136 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Scgb1b34-ps-201ENSMUST00000187959 331 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm9127-201ENSMUST00000188041 985 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm28783-201ENSMUST00000188872 359 ntTSL 5 BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm29592-201ENSMUST00000189434 370 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm43762-201ENSMUST00000201521 295 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm44219-201ENSMUST00000203005 273 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm44254-201ENSMUST00000204184 322 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm45082-201ENSMUST00000206082 601 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 AC174797.3-202ENSMUST00000224578 587 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 AC144798.1-201ENSMUST00000228120 391 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm5582-201ENSMUST00000075251 522 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 n-R5s94-201ENSMUST00000082573 119 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Rpl26-ps2-201ENSMUST00000085379 435 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm5930-201ENSMUST00000111863 1746 ntAPPRIS P1 TSL 5 BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Gm42781-201ENSMUST00000201317 2719 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 AC162908.1-201ENSMUST00000219164 4563 ntBASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Rhbdd1-202ENSMUST00000140020 3687 ntAPPRIS P1 TSL 1 (best) BASIC6.69□□□□□ -1.34
Trim11Q99PQ2 Olfr1273-ps-201ENSMUST00000214356 4698 ntAPPRIS P1 TSL 3 BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm18878-201ENSMUST00000223071 1443 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Ugt2b34-202ENSMUST00000113333 4312 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 AC158779.2-201ENSMUST00000227902 1947 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm42798-201ENSMUST00000200853 3972 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm26002-201ENSMUST00000101915 107 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Mir449c-201ENSMUST00000102192 109 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Igkv4-91-201ENSMUST00000103333 358 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Igkv4-74-201ENSMUST00000103344 394 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Scgb1b26-ps-201ENSMUST00000121845 291 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm25782-201ENSMUST00000122526 289 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm12631-201ENSMUST00000130576 637 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm15691-201ENSMUST00000138626 849 ntTSL 3 BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm23279-201ENSMUST00000157912 97 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm25013-201ENSMUST00000158402 128 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm15946-201ENSMUST00000160654 423 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Olfr758-ps1-201ENSMUST00000173901 841 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm7094-201ENSMUST00000178379 366 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm32175-201ENSMUST00000193641 346 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Igkv4-73-201ENSMUST00000199760 358 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm44374-201ENSMUST00000199821 140 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm5990-201ENSMUST00000203126 746 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm44060-201ENSMUST00000204440 410 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm44852-201ENSMUST00000207950 369 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 AC122465.3-201ENSMUST00000221644 355 ntBASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Cd200r3-201ENSMUST00000048479 986 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Prl2c1-201ENSMUST00000054932 681 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Trim11Q99PQ2 Gm6104-201ENSMUST00000078030 603 ntBASIC6.68□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms