Protein–RNA interactions for Protein: Q8CDY9

Pcdhb7, Protocadherin beta 7, mousemouse

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb7Q8CDY9 Gm29228-201ENSMUST00000185489 418 ntBASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 1700015G11Rik-204ENSMUST00000190307 255 ntAPPRIS ALT2 TSL 3 BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Gm43601-201ENSMUST00000196294 945 ntBASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Gm9504-201ENSMUST00000196322 468 ntBASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Gm43160-201ENSMUST00000196453 421 ntBASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Gm42543-201ENSMUST00000198756 353 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Gm7832-201ENSMUST00000202613 880 ntBASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Gm45722-201ENSMUST00000213075 466 ntBASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Gm7198-201ENSMUST00000219635 1074 ntBASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Ifngas1-201ENSMUST00000220034 1121 ntTSL 2 BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 4930529N20Rik-201ENSMUST00000220538 639 ntTSL 3 BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 AC166358.7-201ENSMUST00000221132 108 ntBASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 AC125543.5-201ENSMUST00000222799 108 ntBASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 CT030254.2-201ENSMUST00000225902 502 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 AC123656.1-201ENSMUST00000227121 581 ntBASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Vmn1r176-204ENSMUST00000227129 2955 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 AC131029.2-202ENSMUST00000228430 496 ntBASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Vmn1r176-207ENSMUST00000228793 2959 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Gm5160-201ENSMUST00000069552 444 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Cryba1-201ENSMUST00000078623 778 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Gm22508-201ENSMUST00000082772 110 ntBASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Olfr69-201ENSMUST00000106878 2829 ntAPPRIS P1 TSL 5 BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Rnf180-202ENSMUST00000224011 3785 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Gm36660-201ENSMUST00000218323 3871 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Gm10603-202ENSMUST00000184420 4520 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Gm12845-201ENSMUST00000203629 1767 ntAPPRIS P5 TSL 5 BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Bclaf1-202ENSMUST00000092678 5307 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 Gsdmc-201ENSMUST00000110125 2405 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Pcdhb7Q8CDY9 4933427D14Rik-201ENSMUST00000108505 1495 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Triml1-201ENSMUST00000059692 1850 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 BC064078-202ENSMUST00000131176 2299 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Lgi1-209ENSMUST00000199812 2262 ntTSL 5 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Vmn1r193-204ENSMUST00000228303 6653 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Sspo-202ENSMUST00000169350 15571 ntAPPRIS P2 TSL 5 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 D330045A20Rik-202ENSMUST00000113030 3736 ntAPPRIS P3 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Vezt-204ENSMUST00000119818 11138 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm44039-201ENSMUST00000204192 2246 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Ttk-201ENSMUST00000070326 2871 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm19113-201ENSMUST00000217552 1828 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Dnal1-202ENSMUST00000123491 5727 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Vmn1r219-202ENSMUST00000226845 5979 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Vmn1r219-205ENSMUST00000228666 5993 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Vmn1r181-203ENSMUST00000226978 4371 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Olfr1381-202ENSMUST00000213256 4954 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm24869-201ENSMUST00000104072 128 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Snord88a-201ENSMUST00000116723 90 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm13141-201ENSMUST00000117417 456 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm14870-201ENSMUST00000118414 156 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm23214-201ENSMUST00000122716 157 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm25395-201ENSMUST00000157343 272 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 4930405H06Rik-201ENSMUST00000159244 791 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm17121-201ENSMUST00000170414 847 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Esp4-201ENSMUST00000178498 553 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm17048-201ENSMUST00000179266 847 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm17222-201ENSMUST00000180135 847 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm28283-201ENSMUST00000185509 178 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm28995-201ENSMUST00000186625 261 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm18117-201ENSMUST00000187720 742 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm17847-201ENSMUST00000188261 1127 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm28973-201ENSMUST00000189310 613 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm28506-201ENSMUST00000189937 150 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm2367-201ENSMUST00000192374 472 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm42443-201ENSMUST00000198084 1155 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm45173-201ENSMUST00000206819 305 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm45735-201ENSMUST00000212779 319 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 AL669916.5-201ENSMUST00000214874 361 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Zmynd11-223ENSMUST00000222358 340 ntTSL 5 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 AL606472.1-201ENSMUST00000224628 275 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 AC161275.1-201ENSMUST00000224668 208 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 CT009711.2-201ENSMUST00000225352 934 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Cyp4a28-ps-201ENSMUST00000121884 1477 ntBASIC6.53□□□□□ -1.36
Pcdhb7Q8CDY9 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 91.5 ms