Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Xist-201ENSMUST00000127786 17769 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Ighv1-36-201ENSMUST00000103513 348 ntAPPRIS ALT2 BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm22194-201ENSMUST00000116869 95 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm13733-201ENSMUST00000117290 535 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm12683-201ENSMUST00000117528 415 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm12719-201ENSMUST00000118859 241 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm11584-201ENSMUST00000120636 325 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm13808-201ENSMUST00000121353 184 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm16222-201ENSMUST00000124320 1298 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm23069-201ENSMUST00000158240 311 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm17063-201ENSMUST00000168135 456 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Mir3090-201ENSMUST00000175597 87 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm26916-201ENSMUST00000183304 352 ntTSL 5 BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm27883-201ENSMUST00000183941 102 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm27568-201ENSMUST00000184220 99 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm38046-201ENSMUST00000192733 550 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm8599-201ENSMUST00000193033 457 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm37966-201ENSMUST00000193122 326 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm17937-201ENSMUST00000197908 742 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm43531-201ENSMUST00000200676 1114 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm20946-201ENSMUST00000212367 461 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 AC174776.1-201ENSMUST00000221509 405 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 AC174776.2-201ENSMUST00000222561 405 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm6988-201ENSMUST00000222676 375 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 CU024892.1-201ENSMUST00000224869 515 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 CT025689.2-201ENSMUST00000224979 429 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 A530021J07Rik-201ENSMUST00000066005 414 ntTSL 3 BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Olfr273-202ENSMUST00000107670 4796 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm37053-201ENSMUST00000192399 2087 ntBASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
Atg4aQ8C9S8 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Rnf213-201ENSMUST00000093902 16716 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Btf3l4-202ENSMUST00000102740 624 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Gm12734-201ENSMUST00000120228 948 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Gm12288-201ENSMUST00000121054 1282 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Mir3062-201ENSMUST00000174986 105 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Gm28149-201ENSMUST00000187102 378 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Gm20561-201ENSMUST00000188131 292 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Gm21803-201ENSMUST00000188897 693 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Gm28768-201ENSMUST00000189034 378 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Gm2622-201ENSMUST00000200018 471 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Gm43580-201ENSMUST00000202892 284 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Olfr931-ps1-201ENSMUST00000214941 549 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 AC154424.1-201ENSMUST00000225883 799 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 AC122397.2-201ENSMUST00000227422 686 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Art2b-201ENSMUST00000063920 870 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Gm45517-201ENSMUST00000209973 2468 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Rptn-201ENSMUST00000045912 4146 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Vmn2r-ps5-201ENSMUST00000175971 2730 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Fus-202ENSMUST00000079045 2623 ntBASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
Atg4aQ8C9S8 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Gm38403-201ENSMUST00000219032 2357 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
Atg4aQ8C9S8 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms