Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Gm43717-201ENSMUST00000198684 310 ntBASIC5.08□□□□□ -1.6
Herc4Q6PAV2 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.08□□□□□ -1.6
Herc4Q6PAV2 Gm44138-201ENSMUST00000204939 271 ntBASIC5.08□□□□□ -1.6
Herc4Q6PAV2 Gm45007-201ENSMUST00000206237 366 ntBASIC5.08□□□□□ -1.6
Herc4Q6PAV2 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Herc4Q6PAV2 Gm45857-201ENSMUST00000212207 356 ntBASIC5.08□□□□□ -1.6
Herc4Q6PAV2 AC154335.1-201ENSMUST00000224744 395 ntBASIC5.08□□□□□ -1.6
Herc4Q6PAV2 AC159231.1-201ENSMUST00000225365 226 ntBASIC5.08□□□□□ -1.6
Herc4Q6PAV2 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.08□□□□□ -1.6
Herc4Q6PAV2 AC165437.1-201ENSMUST00000228640 536 ntBASIC5.08□□□□□ -1.6
Herc4Q6PAV2 Olfr1216-201ENSMUST00000099800 936 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Herc4Q6PAV2 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC5.08□□□□□ -1.6
Herc4Q6PAV2 AC144772.3-201ENSMUST00000228829 3126 ntBASIC5.08□□□□□ -1.6
Herc4Q6PAV2 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
Herc4Q6PAV2 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.08□□□□□ -1.6
Herc4Q6PAV2 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Herc4Q6PAV2 Gm2099-202ENSMUST00000223310 3341 ntBASIC5.08□□□□□ -1.6
Herc4Q6PAV2 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Herc4Q6PAV2 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Herc4Q6PAV2 Gm42842-201ENSMUST00000197736 3004 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm37250-201ENSMUST00000194919 2388 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm29536-201ENSMUST00000189296 3283 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Zfy1-201ENSMUST00000065545 2783 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm42455-201ENSMUST00000199761 2736 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm42843-201ENSMUST00000196328 3616 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm38152-201ENSMUST00000195389 3566 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Trav5-1-201ENSMUST00000103570 343 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm23594-201ENSMUST00000104307 134 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Rps11-ps5-201ENSMUST00000117302 472 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm5391-201ENSMUST00000121155 613 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm13162-201ENSMUST00000121481 454 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm12807-201ENSMUST00000121546 962 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm24689-201ENSMUST00000157760 104 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm4675-201ENSMUST00000163396 502 ntTSL 3 BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm28847-201ENSMUST00000186778 700 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm28967-201ENSMUST00000187351 281 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm37272-201ENSMUST00000193401 488 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm8874-201ENSMUST00000196826 286 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm43005-201ENSMUST00000199015 648 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm3338-201ENSMUST00000220982 269 ntBASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Olfr16-201ENSMUST00000038432 1050 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Herc4Q6PAV2 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm5141-201ENSMUST00000167516 1743 ntTSL 5 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm42681-201ENSMUST00000197999 1611 ntBASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm24142-201ENSMUST00000101960 107 ntBASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm23193-201ENSMUST00000102427 82 ntBASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Tcrg-C2-201ENSMUST00000103561 914 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm22498-201ENSMUST00000104497 86 ntBASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm22899-201ENSMUST00000104540 131 ntBASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm16128-201ENSMUST00000117855 626 ntBASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm26371-201ENSMUST00000157829 104 ntBASIC5.06□□□□□ -1.6
Herc4Q6PAV2 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm37881-201ENSMUST00000193001 421 ntBASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm9238-201ENSMUST00000196181 329 ntBASIC5.06□□□□□ -1.6
Herc4Q6PAV2 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm45096-201ENSMUST00000205833 427 ntTSL 3 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm44869-201ENSMUST00000208836 357 ntBASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm18442-201ENSMUST00000220925 639 ntBASIC5.06□□□□□ -1.6
Herc4Q6PAV2 AC159252.1-201ENSMUST00000224450 553 ntBASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Olfr1145-202ENSMUST00000090707 978 ntAPPRIS P2 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Olfr487-202ENSMUST00000216489 3785 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Herc4Q6PAV2 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Herc4Q6PAV2 Olfr270-203ENSMUST00000215010 2502 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Herc4Q6PAV2 Gm18422-202ENSMUST00000203798 2214 ntBASIC5.05□□□□□ -1.6
Herc4Q6PAV2 Gm42645-201ENSMUST00000201573 1627 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms