Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.49□□□□□ -1.53
Usp49Q6P9L4 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC5.49□□□□□ -1.53
Usp49Q6P9L4 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Usp49Q6P9L4 AC161114.1-201ENSMUST00000218223 474 ntBASIC5.49□□□□□ -1.53
Usp49Q6P9L4 Gm6841-201ENSMUST00000220602 598 ntBASIC5.49□□□□□ -1.53
Usp49Q6P9L4 Gm7822-201ENSMUST00000222433 581 ntBASIC5.49□□□□□ -1.53
Usp49Q6P9L4 AC158511.1-201ENSMUST00000223622 764 ntBASIC5.49□□□□□ -1.53
Usp49Q6P9L4 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp49Q6P9L4 Gm5045-201ENSMUST00000027054 810 ntBASIC5.49□□□□□ -1.53
Usp49Q6P9L4 Olfr843-201ENSMUST00000061365 1107 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Usp49Q6P9L4 Gm4963-201ENSMUST00000072718 378 ntBASIC5.49□□□□□ -1.53
Usp49Q6P9L4 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
Usp49Q6P9L4 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.49□□□□□ -1.53
Usp49Q6P9L4 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp49Q6P9L4 C130073E24Rik-202ENSMUST00000211313 14112 ntTSL 5 BASIC5.49□□□□□ -1.53
Usp49Q6P9L4 Cbx5-202ENSMUST00000118152 8803 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp49Q6P9L4 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Usp49Q6P9L4 1700022I11Rik-201ENSMUST00000030163 3727 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp49Q6P9L4 Slco1c1-203ENSMUST00000203140 2771 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Usp49Q6P9L4 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Usp49Q6P9L4 Zfp788-202ENSMUST00000098508 3775 ntAPPRIS P5 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp49Q6P9L4 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm14406-202ENSMUST00000108945 1348 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 AC154552.6-201ENSMUST00000221365 1342 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Zfp433-201ENSMUST00000085664 1800 ntTSL 5 BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 AC121569.1-201ENSMUST00000221043 3666 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Ugt2b1-201ENSMUST00000031183 2573 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Hc-201ENSMUST00000028233 5445 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Mir466i-201ENSMUST00000116924 121 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm12584-201ENSMUST00000117109 1105 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm2003-201ENSMUST00000118537 636 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm11746-201ENSMUST00000119843 821 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm13867-201ENSMUST00000120844 395 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm1989-201ENSMUST00000126244 636 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm12854-201ENSMUST00000128518 297 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 2210408F21Rik-203ENSMUST00000133510 429 ntTSL 3 BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm25713-201ENSMUST00000158625 109 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm22116-201ENSMUST00000158791 141 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm17061-201ENSMUST00000163167 499 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm17038-201ENSMUST00000166586 494 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Obox3-ps8-201ENSMUST00000177182 960 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm25120-201ENSMUST00000180148 79 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm20056-201ENSMUST00000194813 519 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Igkv12-47-201ENSMUST00000196961 356 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm44234-201ENSMUST00000204246 900 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm18855-201ENSMUST00000206689 570 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm45636-201ENSMUST00000210497 1064 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 CT571256.1-201ENSMUST00000226045 585 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm7665-201ENSMUST00000076710 297 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Snord15b-201ENSMUST00000083032 145 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm22741-201ENSMUST00000083438 165 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Cfap61-207ENSMUST00000138774 3308 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Vmn2r99-201ENSMUST00000176107 2571 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 St18-210ENSMUST00000150761 4264 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 AC149294.7-201ENSMUST00000227475 1432 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Gm7171-201ENSMUST00000177413 1349 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 AC151904.4-201ENSMUST00000219868 1319 ntBASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp49Q6P9L4 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Gm3115-201ENSMUST00000166928 1797 ntAPPRIS P5 TSL 5 BASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Cd44-202ENSMUST00000060516 3495 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Gm24578-201ENSMUST00000103970 129 ntBASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Gm15159-201ENSMUST00000117062 764 ntBASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Gm15012-201ENSMUST00000119176 106 ntBASIC5.47□□□□□ -1.53
Usp49Q6P9L4 Gm24592-201ENSMUST00000122505 106 ntBASIC5.47□□□□□ -1.53
Usp49Q6P9L4 4930419G24Rik-201ENSMUST00000125494 1058 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms