Protein–RNA interactions for Protein: Q5SNZ0

Ccdc88a, Girdin, mousemouse

Predictions only

Length 1,873 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88aQ5SNZ0 Gm42611-201ENSMUST00000199446 3407 ntBASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Fap-202ENSMUST00000102732 2751 ntAPPRIS P2 TSL 1 (best) BASIC5.21□□□□□ -1.58
Ccdc88aQ5SNZ0 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm12252-201ENSMUST00000119517 219 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm22958-201ENSMUST00000122512 184 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm37964-201ENSMUST00000192459 4905 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm43710-201ENSMUST00000199583 452 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm18011-201ENSMUST00000203717 565 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm44583-201ENSMUST00000207478 281 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Olfr1451-202ENSMUST00000207997 1698 ntAPPRIS P1 TSL 3 BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm45885-202ENSMUST00000211520 1383 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 AC122448.1-201ENSMUST00000226317 772 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Mir132-201ENSMUST00000083603 66 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Olfr1226-205ENSMUST00000216445 7046 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Olfr813-202ENSMUST00000204622 2410 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm17131-201ENSMUST00000164420 3846 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm15581-201ENSMUST00000131334 5640 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 AC129085.3-201ENSMUST00000225686 1705 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Abcc9-203ENSMUST00000100827 7306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Vmn2r105-201ENSMUST00000167382 2583 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm26418-201ENSMUST00000104275 137 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm11406-201ENSMUST00000117418 484 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm14107-201ENSMUST00000117774 330 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm11394-201ENSMUST00000181421 517 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm27695-201ENSMUST00000184301 91 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 AC155266.1-201ENSMUST00000220762 904 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Rpl32-ps-201ENSMUST00000091052 506 ntBASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Ccdc88aQ5SNZ0 Vwa5a-201ENSMUST00000001544 4157 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm5373-202ENSMUST00000212931 2964 ntTSL 2 BASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Zan-204ENSMUST00000164178 16451 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Zfp667-202ENSMUST00000108562 3498 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm37781-201ENSMUST00000194773 3218 ntBASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm43059-201ENSMUST00000202437 1388 ntBASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm14790-201ENSMUST00000117760 1293 ntBASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm11958-201ENSMUST00000127224 253 ntTSL 5 BASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm18452-201ENSMUST00000202968 1111 ntBASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm4045-201ENSMUST00000204076 310 ntBASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 C430039J01Rik-201ENSMUST00000205973 957 ntBASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 AC155805.1-201ENSMUST00000222419 3808 ntBASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm37733-201ENSMUST00000195478 2962 ntBASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Ccdc88aQ5SNZ0 Cast-208ENSMUST00000223033 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm8402-201ENSMUST00000118183 1770 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm8383-201ENSMUST00000121179 1770 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm8129-201ENSMUST00000118230 213 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm23391-201ENSMUST00000157579 104 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm23781-201ENSMUST00000157940 308 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm16558-201ENSMUST00000163015 532 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm37073-201ENSMUST00000192469 1222 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm44354-201ENSMUST00000196017 143 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm44038-201ENSMUST00000203952 889 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm7807-201ENSMUST00000212475 578 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Olfr1133-202ENSMUST00000217368 993 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 AC124562.1-201ENSMUST00000224673 337 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 AC122035.2-201ENSMUST00000228698 462 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm5548-201ENSMUST00000055878 397 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 n-R5s162-201ENSMUST00000082581 119 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm44321-201ENSMUST00000204262 2855 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm37668-201ENSMUST00000193745 1944 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Vmn2r-ps56-201ENSMUST00000174814 2596 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 BC018473-204ENSMUST00000156293 4753 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm29506-201ENSMUST00000191045 2078 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm9597-202ENSMUST00000227632 1387 ntBASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Chil6-201ENSMUST00000029510 1668 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Il5ra-202ENSMUST00000204659 3575 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm14687-201ENSMUST00000120206 363 ntBASIC5.17□□□□□ -1.58
Ccdc88aQ5SNZ0 Gm5379-201ENSMUST00000120973 826 ntBASIC5.17□□□□□ -1.58
Ccdc88aQ5SNZ0 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 84.6 ms