Protein–RNA interactions for Protein: Q5NCC3

Trim41, E3 ubiquitin-protein ligase TRIM41, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim41Q5NCC3 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Trim41Q5NCC3 Kcnmb2-205ENSMUST00000192429 2357 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gcc2-207ENSMUST00000162041 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Zkscan1-202ENSMUST00000066617 8042 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm37423-201ENSMUST00000194246 3342 ntBASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Amer1-201ENSMUST00000084535 8496 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 A230108P19Rik-201ENSMUST00000151782 2500 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Kif2a-204ENSMUST00000122233 3533 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Itpr2-201ENSMUST00000053273 8331 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm4994-201ENSMUST00000118379 2187 ntBASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Ighv3-1-201ENSMUST00000103478 350 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm25325-201ENSMUST00000122559 86 ntBASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 G630016G05Rik-201ENSMUST00000152412 796 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm25982-201ENSMUST00000157920 101 ntBASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Speer6-ps1-201ENSMUST00000168736 545 ntBASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm21828-201ENSMUST00000178050 543 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm21866-201ENSMUST00000178428 543 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm21725-201ENSMUST00000178519 543 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm21800-201ENSMUST00000178559 543 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 1700010L04Rik-202ENSMUST00000178848 786 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm21852-201ENSMUST00000179125 543 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm21764-201ENSMUST00000179219 543 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm21891-201ENSMUST00000179284 543 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm21904-201ENSMUST00000179522 543 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm25873-201ENSMUST00000180317 107 ntBASIC10.85□□□□□ -0.67
Trim41Q5NCC3 4930461G14Rik-201ENSMUST00000181967 843 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm39119-201ENSMUST00000208466 951 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 AC137127.3-201ENSMUST00000213340 349 ntBASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm2446-201ENSMUST00000220144 772 ntBASIC10.85□□□□□ -0.67
Trim41Q5NCC3 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 AC134468.1-201ENSMUST00000220869 299 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Vmn1r86-202ENSMUST00000226604 6378 ntAPPRIS P2 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Nxf7-202ENSMUST00000113163 2233 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 C030017G13Rik-201ENSMUST00000202959 2331 ntBASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Hsf2-201ENSMUST00000079833 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Vmn1r30-204ENSMUST00000228577 1968 ntAPPRIS P1 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Heatr1-201ENSMUST00000059270 6780 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Trim41Q5NCC3 Sis-201ENSMUST00000094190 5887 ntAPPRIS P1 TSL 2 BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Gm43187-201ENSMUST00000200652 2397 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Chl1-206ENSMUST00000205098 2464 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Spire1-201ENSMUST00000045105 5033 ntAPPRIS P2 TSL 5 BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Gm43279-201ENSMUST00000202376 2512 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Arhgap15-203ENSMUST00000112824 3118 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Gm14575-201ENSMUST00000117210 560 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Gm14804-201ENSMUST00000122322 508 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 4930405D11Rik-201ENSMUST00000132218 568 ntTSL 3 BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Trbv10-201ENSMUST00000168322 289 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Gm26746-201ENSMUST00000181722 487 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Gm28492-201ENSMUST00000190899 1019 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Trbv9-201ENSMUST00000194494 290 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Gm4587-201ENSMUST00000209135 637 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Kcnj1-203ENSMUST00000213393 1277 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Gm8863-201ENSMUST00000216630 926 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 AC153141.1-201ENSMUST00000218636 501 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Gm32526-201ENSMUST00000221878 981 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Rpgr-201ENSMUST00000044598 3805 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Olfr748-201ENSMUST00000073561 924 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Gm24037-201ENSMUST00000082871 180 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Gm23238-201ENSMUST00000083007 164 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Gm24405-201ENSMUST00000083033 167 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 n-R5s79-201ENSMUST00000083071 120 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Olfr651-201ENSMUST00000098176 1069 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Peak1-204ENSMUST00000188142 7524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 4933440M02Rik-201ENSMUST00000061823 3801 ntTSL 2 BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Ifi206-201ENSMUST00000160565 3047 ntAPPRIS P1 TSL 5 BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Adam28-203ENSMUST00000224039 2638 ntAPPRIS ALT2 BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 AC154734.1-201ENSMUST00000219957 2141 ntBASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC10.84□□□□□ -0.67
Trim41Q5NCC3 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.67
Trim41Q5NCC3 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Tmem68-201ENSMUST00000029891 2690 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Gal3st2c-201ENSMUST00000097632 9667 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Gm28470-201ENSMUST00000186912 1498 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Gm28741-201ENSMUST00000189417 1498 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Gm37840-202ENSMUST00000194805 1498 ntTSL 5 BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Vmn2r121-201ENSMUST00000094491 3062 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Trim41Q5NCC3 Gm13355-201ENSMUST00000117996 317 ntBASIC10.83□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 83.6 ms