Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.31□□□□□ -1.56
Usp39Q3TIX9 Gm42701-201ENSMUST00000196117 1657 ntBASIC5.31□□□□□ -1.56
Usp39Q3TIX9 Fcrl5-205ENSMUST00000194102 2449 ntAPPRIS P4 TSL 1 (best) BASIC5.31□□□□□ -1.56
Usp39Q3TIX9 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Mug-ps1-201ENSMUST00000186891 4386 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Vmn1r49-202ENSMUST00000203791 1356 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 AC152944.1-201ENSMUST00000220160 3101 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Lair1-201ENSMUST00000068865 6828 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm44527-202ENSMUST00000204519 1314 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Amy2a3-201ENSMUST00000179314 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Amy2a4-201ENSMUST00000179568 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Amy2a2-201ENSMUST00000098667 3717 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm44144-201ENSMUST00000203683 1960 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm23910-201ENSMUST00000104597 132 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm15402-201ENSMUST00000114051 670 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm14520-201ENSMUST00000119258 387 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm14472-201ENSMUST00000119815 282 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm11876-201ENSMUST00000120002 269 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm16412-201ENSMUST00000121602 273 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm25807-201ENSMUST00000122783 305 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm13838-201ENSMUST00000132130 531 ntTSL 5 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm15265-201ENSMUST00000133494 551 ntTSL 2 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm22596-201ENSMUST00000157601 316 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm23280-201ENSMUST00000157905 139 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm10177-202ENSMUST00000161698 207 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Pfdn5-208ENSMUST00000170627 330 ntTSL 5 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm7271-201ENSMUST00000172369 519 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm16531-201ENSMUST00000180658 967 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm8676-201ENSMUST00000184206 637 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm27942-201ENSMUST00000184669 101 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm27538-201ENSMUST00000185065 294 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm18406-201ENSMUST00000185872 669 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm29540-201ENSMUST00000188207 337 ntTSL 3 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm19777-201ENSMUST00000191940 358 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm37503-201ENSMUST00000192088 319 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm38221-201ENSMUST00000195146 365 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm38109-201ENSMUST00000195386 181 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 4930519L02Rik-202ENSMUST00000200254 452 ntTSL 3 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm44277-201ENSMUST00000205128 649 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 4930505K13Rik-201ENSMUST00000208641 546 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm46102-201ENSMUST00000217005 731 ntTSL 5 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm2544-201ENSMUST00000222702 756 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm7768-201ENSMUST00000222988 597 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 AC117202.3-201ENSMUST00000228532 310 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Defa34-201ENSMUST00000075268 375 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm17165-201ENSMUST00000096155 493 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Olfr704-202ENSMUST00000098141 948 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Bcl2a1a-201ENSMUST00000098485 819 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Defa5-201ENSMUST00000098892 376 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm43319-201ENSMUST00000198036 2270 ntBASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Olfr1427-202ENSMUST00000215374 3342 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Vmn1r210-203ENSMUST00000226294 3500 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Usp39Q3TIX9 Gm43059-201ENSMUST00000202437 1388 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Nlrp9c-201ENSMUST00000041845 2631 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm38505-201ENSMUST00000174005 1326 ntTSL 5 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm9408-201ENSMUST00000197375 1505 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Mecom-204ENSMUST00000166001 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm37551-201ENSMUST00000195556 2861 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Orc3-202ENSMUST00000108142 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Olfr828-201ENSMUST00000104914 939 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm11032-201ENSMUST00000109941 102 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm14220-201ENSMUST00000118114 449 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm13887-201ENSMUST00000119009 344 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm13574-201ENSMUST00000120482 394 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm6175-201ENSMUST00000121351 400 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm25489-201ENSMUST00000158727 141 ntBASIC5.29□□□□□ -1.56
Usp39Q3TIX9 Gm18343-201ENSMUST00000172802 604 ntBASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms