Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm15452-201ENSMUST00000119877 240 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm13368-201ENSMUST00000122443 430 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm12066-201ENSMUST00000123592 443 ntTSL 3 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm5353-201ENSMUST00000139800 793 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm11545-201ENSMUST00000146507 375 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm8121-201ENSMUST00000153583 499 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm24534-201ENSMUST00000157949 291 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm23965-201ENSMUST00000157969 142 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm23546-201ENSMUST00000158211 137 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm8338-201ENSMUST00000163928 363 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm9593-201ENSMUST00000166034 469 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Hspe1-ps3-201ENSMUST00000172726 277 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm18343-201ENSMUST00000172802 604 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm24315-201ENSMUST00000177835 127 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Ranbp2-ps7-201ENSMUST00000183924 384 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm28429-201ENSMUST00000188521 363 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm17981-201ENSMUST00000191109 739 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm37313-201ENSMUST00000191673 290 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm37523-201ENSMUST00000194901 412 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm37477-201ENSMUST00000195215 884 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm42522-201ENSMUST00000196071 255 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm43157-201ENSMUST00000198223 412 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm43675-201ENSMUST00000199468 1184 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm43468-201ENSMUST00000199769 397 ntTSL 3 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm42109-202ENSMUST00000200893 664 ntTSL 3 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm44254-201ENSMUST00000204184 322 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Olfr1309-201ENSMUST00000207885 964 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm45689-201ENSMUST00000210522 133 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm7751-201ENSMUST00000212868 709 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 CR974485.1-201ENSMUST00000222408 402 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm2614-201ENSMUST00000223227 403 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 CT025667.1-201ENSMUST00000225872 382 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 CT030704.1-201ENSMUST00000227521 699 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Ceacam13-201ENSMUST00000081703 946 ntAPPRIS P3 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 n-R5s215-201ENSMUST00000082480 104 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm26072-201ENSMUST00000083135 107 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Olfr646-201ENSMUST00000098182 939 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Olfr48-201ENSMUST00000099762 906 ntAPPRIS P1 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Vmn1r84-204ENSMUST00000227427 2880 ntAPPRIS ALT2 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 Iqca-201ENSMUST00000113094 3210 ntAPPRIS P2 TSL 5 BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.08□□□□□ -1.6
Col8a1Q00780 Gm43682-201ENSMUST00000202150 2090 ntBASIC5.08□□□□□ -1.6
Col8a1Q00780 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Soat1-201ENSMUST00000051396 2925 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Mpeg1-201ENSMUST00000081035 4335 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Palmd-202ENSMUST00000119557 3305 ntAPPRIS ALT2 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Cpa3-201ENSMUST00000001921 1449 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm43900-201ENSMUST00000204868 2669 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Catsperg2-209ENSMUST00000209126 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm26002-201ENSMUST00000101915 107 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm10936-201ENSMUST00000105264 252 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Dclre1c-204ENSMUST00000115066 3828 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm15126-201ENSMUST00000118631 833 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm12308-201ENSMUST00000120440 389 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm6031-201ENSMUST00000121314 1054 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm15877-201ENSMUST00000121897 964 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm13409-201ENSMUST00000122072 546 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm15335-201ENSMUST00000122442 411 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm16373-201ENSMUST00000129517 303 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC5.07□□□□□ -1.6
Col8a1Q00780 Saxo1os-201ENSMUST00000131790 628 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC5.07□□□□□ -1.6
Col8a1Q00780 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col8a1Q00780 C330018D20Rik-202ENSMUST00000139243 726 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm26106-201ENSMUST00000157254 228 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm22867-201ENSMUST00000157499 109 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm25669-201ENSMUST00000157699 112 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm17086-201ENSMUST00000171346 484 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm24081-201ENSMUST00000175177 125 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Col8a1Q00780 Ap3s1-ps2-201ENSMUST00000178107 579 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm26731-201ENSMUST00000180683 543 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm27543-201ENSMUST00000183562 177 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Obox4-ps2-201ENSMUST00000185088 442 ntBASIC5.07□□□□□ -1.6
Col8a1Q00780 Gm29529-201ENSMUST00000187154 714 ntTSL 3 BASIC5.07□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms