Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm40608-201ENSMUST00000213692 654 ntTSL 3 BASIC5.61□□□□□ -1.51
SgcbP82349 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 AC153971.1-201ENSMUST00000215097 3811 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 Mdga2-213ENSMUST00000223141 2850 ntTSL 2 BASIC5.61□□□□□ -1.51
SgcbP82349 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.61□□□□□ -1.51
SgcbP82349 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.61□□□□□ -1.51
SgcbP82349 AC122459.2-201ENSMUST00000227099 638 ntBASIC5.61□□□□□ -1.51
SgcbP82349 AC113031.1-201ENSMUST00000227400 432 ntBASIC5.61□□□□□ -1.51
SgcbP82349 AC117588.3-201ENSMUST00000228517 325 ntBASIC5.61□□□□□ -1.51
SgcbP82349 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Tfb1m-201ENSMUST00000041003 1327 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.51
SgcbP82349 Ifi205-201ENSMUST00000059226 1613 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Gm16568-201ENSMUST00000066038 1910 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 Dopey1-201ENSMUST00000034987 8933 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 Olfr1382-203ENSMUST00000213707 4294 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 Olfr1382-204ENSMUST00000213899 4285 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 Olfr1382-205ENSMUST00000217564 4287 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 Tsga10-201ENSMUST00000041815 3400 ntAPPRIS P3 TSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Olfr1386-202ENSMUST00000204518 2553 ntAPPRIS P1 TSL 3 BASIC5.61□□□□□ -1.51
SgcbP82349 Gm6882-202ENSMUST00000207192 2365 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SgcbP82349 Gm10723-201ENSMUST00000195366 6918 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Olfr922-202ENSMUST00000213164 4028 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SgcbP82349 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Ap5m1-208ENSMUST00000228238 3514 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Fmo9-201ENSMUST00000027843 3065 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Olfr701-202ENSMUST00000166880 1444 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
SgcbP82349 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Dnajb7-201ENSMUST00000057236 1374 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SgcbP82349 Gm37967-201ENSMUST00000195634 2665 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SgcbP82349 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Gm25088-201ENSMUST00000101803 79 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Gm11462-201ENSMUST00000117749 562 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Gm15531-201ENSMUST00000118062 252 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Gm9059-201ENSMUST00000118319 183 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Spink8-201ENSMUST00000118732 637 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Gm22208-201ENSMUST00000122658 110 ntBASIC5.6□□□□□ -1.51
SgcbP82349 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Gtsf1-204ENSMUST00000136480 767 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
SgcbP82349 Lrrc75aos1-201ENSMUST00000142492 779 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Gm26162-201ENSMUST00000157793 132 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Gm17118-201ENSMUST00000164032 335 ntTSL 5 BASIC5.6□□□□□ -1.51
SgcbP82349 Gm17196-201ENSMUST00000164074 345 ntTSL 5 BASIC5.6□□□□□ -1.51
SgcbP82349 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SgcbP82349 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SgcbP82349 Gm26556-201ENSMUST00000180645 320 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Gm26988-201ENSMUST00000183296 945 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Gm27348-201ENSMUST00000184511 170 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Gm18802-201ENSMUST00000186270 888 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Gm29134-201ENSMUST00000186579 126 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Gm28666-201ENSMUST00000186649 274 ntBASIC5.6□□□□□ -1.51
SgcbP82349 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC5.6□□□□□ -1.51
SgcbP82349 Gm28930-201ENSMUST00000189525 437 ntTSL 5 BASIC5.6□□□□□ -1.51
SgcbP82349 Gm28241-201ENSMUST00000190916 235 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Gm22897-201ENSMUST00000197860 128 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC5.6□□□□□ -1.51
SgcbP82349 Gm43150-201ENSMUST00000200931 636 ntTSL 3 BASIC5.6□□□□□ -1.51
SgcbP82349 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Gm34113-201ENSMUST00000213796 388 ntTSL 2 BASIC5.6□□□□□ -1.51
SgcbP82349 AC166358.10-201ENSMUST00000220556 144 ntBASIC5.6□□□□□ -1.51
SgcbP82349 AC159244.1-201ENSMUST00000220964 594 ntBASIC5.6□□□□□ -1.51
SgcbP82349 CT025689.4-201ENSMUST00000225926 601 ntBASIC5.6□□□□□ -1.51
SgcbP82349 AC126690.1-201ENSMUST00000228898 397 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Olfr835-201ENSMUST00000059315 936 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
SgcbP82349 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Gm24037-201ENSMUST00000082871 180 ntBASIC5.6□□□□□ -1.51
SgcbP82349 AC154406.1-201ENSMUST00000215220 2529 ntBASIC5.6□□□□□ -1.51
SgcbP82349 F830112A20Rik-201ENSMUST00000194249 3552 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Zfhx4-203ENSMUST00000175866 11287 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
SgcbP82349 Homer2-202ENSMUST00000098326 10982 ntTSL 5 BASIC5.6□□□□□ -1.51
SgcbP82349 Xpo7-202ENSMUST00000167242 15121 ntAPPRIS ALT1 TSL 5 BASIC5.6□□□□□ -1.51
SgcbP82349 Zfp874a-202ENSMUST00000075255 3238 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Gm12763-201ENSMUST00000151344 1939 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC5.6□□□□□ -1.51
SgcbP82349 Gm7709-201ENSMUST00000199391 1858 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
SgcbP82349 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC5.6□□□□□ -1.51
SgcbP82349 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
SgcbP82349 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 70.7 ms