Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 n-R5s27-201ENSMUST00000093699 119 ntBASIC4.47□□□□□ -1.69
Cdh11P55288 Gm3089-201ENSMUST00000200804 1395 ntBASIC4.47□□□□□ -1.69
Cdh11P55288 Gm3302-201ENSMUST00000201462 1395 ntBASIC4.47□□□□□ -1.69
Cdh11P55288 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.47□□□□□ -1.69
Cdh11P55288 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cdh11P55288 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.47□□□□□ -1.69
Cdh11P55288 Otc-202ENSMUST00000115528 2997 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cdh11P55288 A330087D11Rik-201ENSMUST00000187265 1334 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Cdh11P55288 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.69
Cdh11P55288 Gm27013-202ENSMUST00000205067 1436 ntBASIC4.46□□□□□ -1.69
Cdh11P55288 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC4.46□□□□□ -1.69
Cdh11P55288 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.46□□□□□ -1.69
Cdh11P55288 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Cdh11P55288 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.46□□□□□ -1.69
Cdh11P55288 Gm36963-201ENSMUST00000193506 2324 ntBASIC4.46□□□□□ -1.69
Cdh11P55288 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.69
Cdh11P55288 Chrnb3-203ENSMUST00000211104 3241 ntTSL 1 (best) BASIC4.46□□□□□ -1.69
Cdh11P55288 Vmn1r189-202ENSMUST00000227357 3245 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
Cdh11P55288 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.46□□□□□ -1.69
Cdh11P55288 Olfr211-202ENSMUST00000203700 4880 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Cdh11P55288 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdh11P55288 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cdh11P55288 Mir706-201ENSMUST00000102262 84 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Gm25418-201ENSMUST00000104214 129 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdh11P55288 Cask-202ENSMUST00000115435 726 ntTSL 3 BASIC4.46□□□□□ -1.7
Cdh11P55288 Gm11196-201ENSMUST00000119052 395 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Defa-ps14-201ENSMUST00000121373 418 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 1700007M16Rik-201ENSMUST00000129075 435 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdh11P55288 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC4.46□□□□□ -1.7
Cdh11P55288 8030443G20Rik-201ENSMUST00000140919 903 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdh11P55288 Gm12114-201ENSMUST00000147896 656 ntTSL 3 BASIC4.46□□□□□ -1.7
Cdh11P55288 Gm23993-201ENSMUST00000157478 144 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Gm25865-201ENSMUST00000158247 104 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Gm16566-201ENSMUST00000160387 910 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Gm16094-201ENSMUST00000162784 427 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdh11P55288 Bhlhe40-202ENSMUST00000163617 476 ntTSL 2 BASIC4.46□□□□□ -1.7
Cdh11P55288 Gm6673-201ENSMUST00000166114 700 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Mir5103-201ENSMUST00000175111 79 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Mir1264-201ENSMUST00000175381 86 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC4.46□□□□□ -1.7
Cdh11P55288 Pou6f2-206ENSMUST00000184299 793 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdh11P55288 Gm29534-201ENSMUST00000187328 382 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdh11P55288 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC4.46□□□□□ -1.7
Cdh11P55288 Gm37533-201ENSMUST00000193848 545 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Gm18843-201ENSMUST00000194982 719 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Gm42814-201ENSMUST00000199370 460 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Gm42976-201ENSMUST00000200313 222 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC4.46□□□□□ -1.7
Cdh11P55288 Gm8319-201ENSMUST00000205708 641 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC4.46□□□□□ -1.7
Cdh11P55288 Gm5649-201ENSMUST00000217918 951 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Gm18387-201ENSMUST00000220333 702 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 CT010456.2-201ENSMUST00000222665 1053 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cdh11P55288 AC125484.1-201ENSMUST00000223218 234 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cdh11P55288 Olfr344-201ENSMUST00000075474 930 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cdh11P55288 Olfr1046-201ENSMUST00000099902 951 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cdh11P55288 Tnfrsf26-201ENSMUST00000055723 3107 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdh11P55288 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Gm35629-201ENSMUST00000209684 2241 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Gm45853-201ENSMUST00000212310 3171 ntBASIC4.46□□□□□ -1.7
Cdh11P55288 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdh11P55288 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cdh11P55288 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cdh11P55288 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdh11P55288 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
Cdh11P55288 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdh11P55288 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdh11P55288 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdh11P55288 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdh11P55288 Vmn1r58-201ENSMUST00000108569 10140 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdh11P55288 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdh11P55288 Gm24340-201ENSMUST00000104208 97 ntBASIC4.45□□□□□ -1.7
Cdh11P55288 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Cdh11P55288 Gm3267-201ENSMUST00000118671 473 ntBASIC4.45□□□□□ -1.7
Cdh11P55288 Gm7657-201ENSMUST00000118851 666 ntBASIC4.45□□□□□ -1.7
Cdh11P55288 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Cdh11P55288 Gm12422-201ENSMUST00000121431 302 ntBASIC4.45□□□□□ -1.7
Cdh11P55288 Gm15388-201ENSMUST00000121578 726 ntBASIC4.45□□□□□ -1.7
Cdh11P55288 n-R5s174-201ENSMUST00000122638 121 ntBASIC4.45□□□□□ -1.7
Cdh11P55288 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC4.45□□□□□ -1.7
Cdh11P55288 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC4.45□□□□□ -1.7
Cdh11P55288 Gm16129-201ENSMUST00000152628 486 ntBASIC4.45□□□□□ -1.7
Cdh11P55288 Gm23546-201ENSMUST00000158211 137 ntBASIC4.45□□□□□ -1.7
Cdh11P55288 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC4.45□□□□□ -1.7
Cdh11P55288 I0C0044D17Rik-202ENSMUST00000168045 510 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Cdh11P55288 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC4.45□□□□□ -1.7
Cdh11P55288 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC4.45□□□□□ -1.7
Cdh11P55288 Gm8614-201ENSMUST00000182528 978 ntBASIC4.45□□□□□ -1.7
Cdh11P55288 Gm21045-201ENSMUST00000183058 1020 ntBASIC4.45□□□□□ -1.7
Cdh11P55288 Gm27551-201ENSMUST00000184258 77 ntBASIC4.45□□□□□ -1.7
Cdh11P55288 Gm9443-201ENSMUST00000188406 816 ntBASIC4.45□□□□□ -1.7
Cdh11P55288 Gm28468-201ENSMUST00000188536 615 ntBASIC4.45□□□□□ -1.7
Cdh11P55288 Il20-202ENSMUST00000188581 465 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cdh11P55288 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.45□□□□□ -1.7
Cdh11P55288 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms