Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 Mir879-201ENSMUST00000104703 76 ntBASIC6.78□□□□□ -1.32
Cux1P53564 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Cux1P53564 Gm14725-201ENSMUST00000120324 828 ntBASIC6.78□□□□□ -1.32
Cux1P53564 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC6.78□□□□□ -1.32
Cux1P53564 Gm28153-201ENSMUST00000189853 629 ntTSL 3 BASIC6.78□□□□□ -1.32
Cux1P53564 Gm43853-201ENSMUST00000197162 301 ntBASIC6.78□□□□□ -1.32
Cux1P53564 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC6.78□□□□□ -1.32
Cux1P53564 AC170999.2-201ENSMUST00000226223 264 ntBASIC6.78□□□□□ -1.32
Cux1P53564 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC6.78□□□□□ -1.32
Cux1P53564 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC6.78□□□□□ -1.32
Cux1P53564 B3galt1-201ENSMUST00000042456 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cux1P53564 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cux1P53564 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cux1P53564 Gm14564-201ENSMUST00000122159 294 ntBASIC6.77□□□□□ -1.33
Cux1P53564 Gm25104-201ENSMUST00000122476 163 ntBASIC6.77□□□□□ -1.33
Cux1P53564 Gm25058-201ENSMUST00000157365 128 ntBASIC6.77□□□□□ -1.33
Cux1P53564 Vmn2r-ps68-201ENSMUST00000173880 861 ntBASIC6.77□□□□□ -1.33
Cux1P53564 Gm28267-201ENSMUST00000191093 265 ntBASIC6.77□□□□□ -1.33
Cux1P53564 Gm44463-201ENSMUST00000198895 137 ntBASIC6.77□□□□□ -1.33
Cux1P53564 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC6.77□□□□□ -1.33
Cux1P53564 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC6.77□□□□□ -1.33
Cux1P53564 Gm3213-201ENSMUST00000219296 441 ntBASIC6.77□□□□□ -1.33
Cux1P53564 AC159622.1-201ENSMUST00000221004 554 ntBASIC6.77□□□□□ -1.33
Cux1P53564 n-R5s151-201ENSMUST00000083959 119 ntBASIC6.77□□□□□ -1.33
Cux1P53564 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Cux1P53564 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Cux1P53564 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cux1P53564 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC6.77□□□□□ -1.33
Cux1P53564 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC6.77□□□□□ -1.33
Cux1P53564 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
Cux1P53564 Gm37244-201ENSMUST00000191748 1981 ntBASIC6.77□□□□□ -1.33
Cux1P53564 Olfr419-202ENSMUST00000214725 2685 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Cux1P53564 Phf11d-201ENSMUST00000095157 2666 ntAPPRIS P2 TSL 1 (best) BASIC6.77□□□□□ -1.33
Cux1P53564 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
Cux1P53564 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC6.77□□□□□ -1.33
Cux1P53564 Gm15182-201ENSMUST00000120832 1676 ntBASIC6.77□□□□□ -1.33
Cux1P53564 Gm26019-201ENSMUST00000104407 119 ntBASIC6.76□□□□□ -1.33
Cux1P53564 Mir105-201ENSMUST00000104655 80 ntBASIC6.76□□□□□ -1.33
Cux1P53564 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC6.76□□□□□ -1.33
Cux1P53564 Gm8129-201ENSMUST00000118230 213 ntBASIC6.76□□□□□ -1.33
Cux1P53564 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cux1P53564 Mir6345-201ENSMUST00000184286 128 ntBASIC6.76□□□□□ -1.33
Cux1P53564 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC6.76□□□□□ -1.33
Cux1P53564 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC6.76□□□□□ -1.33
Cux1P53564 Gm8703-201ENSMUST00000203793 730 ntBASIC6.76□□□□□ -1.33
Cux1P53564 2200007N16Rik-201ENSMUST00000206367 238 ntBASIC6.76□□□□□ -1.33
Cux1P53564 AC124408.1-201ENSMUST00000228938 707 ntBASIC6.76□□□□□ -1.33
Cux1P53564 2610303G11Rik-201ENSMUST00000061643 517 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cux1P53564 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Cux1P53564 Gm20356-201ENSMUST00000193390 2477 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cux1P53564 Olfr1204-202ENSMUST00000213283 6935 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
Cux1P53564 Gm26743-201ENSMUST00000180913 1726 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cux1P53564 Gm42910-201ENSMUST00000198917 2921 ntBASIC6.76□□□□□ -1.33
Cux1P53564 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cux1P53564 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cux1P53564 Uty-204ENSMUST00000139365 4684 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cux1P53564 Npat-201ENSMUST00000035850 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cux1P53564 Gm26075-201ENSMUST00000104062 121 ntBASIC6.76□□□□□ -1.33
Cux1P53564 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC6.76□□□□□ -1.33
Cux1P53564 4930441J16Rik-201ENSMUST00000153743 516 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
Cux1P53564 Gm24636-201ENSMUST00000158673 288 ntBASIC6.76□□□□□ -1.33
Cux1P53564 Gm3143-201ENSMUST00000196308 580 ntTSL 3 BASIC6.76□□□□□ -1.33
Cux1P53564 Gm43044-201ENSMUST00000198091 379 ntBASIC6.76□□□□□ -1.33
Cux1P53564 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC6.76□□□□□ -1.33
Cux1P53564 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC6.76□□□□□ -1.33
Cux1P53564 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC6.76□□□□□ -1.33
Cux1P53564 AC153912.1-201ENSMUST00000217011 724 ntAPPRIS P1 TSL 3 BASIC6.76□□□□□ -1.33
Cux1P53564 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC6.76□□□□□ -1.33
Cux1P53564 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
Cux1P53564 Gm25821-201ENSMUST00000093657 133 ntBASIC6.76□□□□□ -1.33
Cux1P53564 Gm45804-201ENSMUST00000212137 3435 ntBASIC6.75□□□□□ -1.33
Cux1P53564 Gm10256-201ENSMUST00000179404 1358 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Cux1P53564 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cux1P53564 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cux1P53564 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cux1P53564 Gm7233-201ENSMUST00000168619 1761 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Cux1P53564 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Cux1P53564 Gm37323-201ENSMUST00000195771 2773 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cux1P53564 Gm7452-202ENSMUST00000202891 3039 ntBASIC6.75□□□□□ -1.33
Cux1P53564 Gm44321-201ENSMUST00000204262 2855 ntBASIC6.75□□□□□ -1.33
Cux1P53564 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Cux1P53564 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC6.75□□□□□ -1.33
Cux1P53564 Gm22601-201ENSMUST00000157595 250 ntBASIC6.75□□□□□ -1.33
Cux1P53564 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC6.75□□□□□ -1.33
Cux1P53564 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC6.75□□□□□ -1.33
Cux1P53564 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
Cux1P53564 Gm18303-201ENSMUST00000190055 1176 ntBASIC6.75□□□□□ -1.33
Cux1P53564 4930433B08Rik-201ENSMUST00000192010 644 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Cux1P53564 Gm44023-201ENSMUST00000203710 469 ntBASIC6.75□□□□□ -1.33
Cux1P53564 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC6.75□□□□□ -1.33
Cux1P53564 AC153382.1-201ENSMUST00000217953 1007 ntTSL 5 BASIC6.75□□□□□ -1.33
Cux1P53564 AC153516.1-201ENSMUST00000217955 779 ntBASIC6.75□□□□□ -1.33
Cux1P53564 Gm40653-202ENSMUST00000222122 1155 ntTSL 5 BASIC6.75□□□□□ -1.33
Cux1P53564 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC6.75□□□□□ -1.33
Cux1P53564 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cux1P53564 Olfr1408-201ENSMUST00000073663 1037 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
Cux1P53564 Olfr830-201ENSMUST00000078861 948 ntAPPRIS P2 BASIC6.75□□□□□ -1.33
Cux1P53564 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
Cux1P53564 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC6.74□□□□□ -1.33
Cux1P53564 AC115970.1-201ENSMUST00000218910 1758 ntBASIC6.74□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 81.2 ms