Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC159379.1-201ENSMUST00000218192 620 ntTSL 5 BASIC5.64□□□□□ -1.51
Shmt1P50431 AC156950.1-201ENSMUST00000219604 456 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 AC155922.1-201ENSMUST00000220100 373 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC5.64□□□□□ -1.51
Shmt1P50431 Gm9628-201ENSMUST00000222169 725 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Shmt1P50431 Gm10115-201ENSMUST00000076071 1228 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Shmt1P50431 Pls3-203ENSMUST00000114058 3032 ntTSL 5 BASIC5.64□□□□□ -1.51
Shmt1P50431 Obox5-201ENSMUST00000098802 1831 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Shmt1P50431 Olfr586-203ENSMUST00000213281 5001 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
Shmt1P50431 Olfr537-ps1-201ENSMUST00000209871 2792 ntAPPRIS P1 TSL 3 BASIC5.64□□□□□ -1.51
Shmt1P50431 Smc5-206ENSMUST00000226111 3265 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Ceacam5-201ENSMUST00000081907 3273 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Shmt1P50431 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.64□□□□□ -1.51
Shmt1P50431 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.64□□□□□ -1.51
Shmt1P50431 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Shmt1P50431 Maoa-201ENSMUST00000026013 4167 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Shmt1P50431 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Shmt1P50431 Gm42614-201ENSMUST00000198724 1554 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 mt-Rnr2-201ENSMUST00000082390 1582 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Olfr1166-201ENSMUST00000099833 1628 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Shmt1P50431 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.63□□□□□ -1.51
Shmt1P50431 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Shmt1P50431 Rmi1-204ENSMUST00000225815 2447 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Shmt1P50431 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Shmt1P50431 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Shmt1P50431 AC165273.1-201ENSMUST00000222780 2452 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Shmt1P50431 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Shmt1P50431 Rpl38-ps1-201ENSMUST00000117723 215 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Shmt1P50431 Rpl23a-ps4-201ENSMUST00000121008 455 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Gm16412-201ENSMUST00000121602 273 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Gm10177-202ENSMUST00000161698 207 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
Shmt1P50431 Gm17542-201ENSMUST00000169859 99 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Shmt1P50431 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC5.63□□□□□ -1.51
Shmt1P50431 Gm21170-201ENSMUST00000179330 498 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Shmt1P50431 Ranbp2-ps8-201ENSMUST00000183723 345 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Mir6400-201ENSMUST00000184870 92 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Shmt1P50431 Gm30097-201ENSMUST00000193581 447 ntTSL 5 BASIC5.63□□□□□ -1.51
Shmt1P50431 Gm37882-201ENSMUST00000195254 196 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC5.63□□□□□ -1.51
Shmt1P50431 Gm44050-201ENSMUST00000204263 527 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Gm18468-201ENSMUST00000207321 369 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Gm18470-201ENSMUST00000207467 420 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Gm18465-201ENSMUST00000207468 369 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Gm18464-201ENSMUST00000207803 420 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Gm18458-201ENSMUST00000207908 369 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Gm18461-201ENSMUST00000208421 420 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Gm18850-201ENSMUST00000211578 388 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 AC118733.1-201ENSMUST00000217387 1217 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Prl7d1-201ENSMUST00000021776 993 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Shmt1P50431 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Shmt1P50431 Gm20368-201ENSMUST00000220716 301 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 4930448C13Rik-204ENSMUST00000221610 1044 ntTSL 5 BASIC5.63□□□□□ -1.51
Shmt1P50431 Gm11360-201ENSMUST00000221898 262 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Icos-201ENSMUST00000027162 810 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Shmt1P50431 Amelx-201ENSMUST00000066112 802 ntAPPRIS P4 TSL 1 (best) BASIC5.63□□□□□ -1.51
Shmt1P50431 n-R5s62-201ENSMUST00000082780 96 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
Shmt1P50431 Gm37936-201ENSMUST00000194647 1322 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Tgtp2-201ENSMUST00000046745 2810 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Shmt1P50431 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Shmt1P50431 Ube2u-201ENSMUST00000092730 1435 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Shmt1P50431 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.63□□□□□ -1.51
Shmt1P50431 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Shmt1P50431 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC5.63□□□□□ -1.51
Shmt1P50431 Gm42702-201ENSMUST00000199515 4217 ntBASIC5.63□□□□□ -1.51
Shmt1P50431 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.62□□□□□ -1.51
Shmt1P50431 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Shmt1P50431 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
Shmt1P50431 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Shmt1P50431 Lgi1-207ENSMUST00000198518 7780 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shmt1P50431 Dsc1-201ENSMUST00000038710 3775 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
Shmt1P50431 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm24429-201ENSMUST00000104076 132 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm9732-201ENSMUST00000111874 492 ntAPPRIS ALT2 TSL 5 BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm15094-201ENSMUST00000118394 1131 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm14732-201ENSMUST00000121372 545 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm12110-201ENSMUST00000121601 579 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm12103-201ENSMUST00000121892 362 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Prdx6-ps2-201ENSMUST00000121989 694 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm14223-201ENSMUST00000146060 517 ntTSL 3 BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC5.62□□□□□ -1.51
Shmt1P50431 C030037F17Rik-201ENSMUST00000155211 406 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
Shmt1P50431 Gm25603-201ENSMUST00000158361 105 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm23205-201ENSMUST00000158671 103 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm10319-202ENSMUST00000159439 846 ntBASIC5.62□□□□□ -1.51
Shmt1P50431 Gm3727-201ENSMUST00000168458 995 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
Shmt1P50431 Rps8-ps1-201ENSMUST00000172445 624 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms