Protein–RNA interactions for Protein: P48377

Rfx1, MHC class II regulatory factor RFX1, mousemouse

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx1P48377 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
Rfx1P48377 Lcp2-201ENSMUST00000052413 3644 ntAPPRIS P2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Rfx1P48377 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
Rfx1P48377 Gm14857-201ENSMUST00000117862 3185 ntBASIC6.88□□□□□ -1.31
Rfx1P48377 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC6.88□□□□□ -1.31
Rfx1P48377 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
Rfx1P48377 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
Rfx1P48377 Cfap70-203ENSMUST00000056073 3615 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
Rfx1P48377 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.88□□□□□ -1.31
Rfx1P48377 AC151971.5-201ENSMUST00000214422 3254 ntBASIC6.88□□□□□ -1.31
Rfx1P48377 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
Rfx1P48377 1700030N03Rik-203ENSMUST00000190575 3146 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx1P48377 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC6.87□□□□□ -1.31
Rfx1P48377 Olfr259-204ENSMUST00000216088 4023 ntAPPRIS P1 TSL 3 BASIC6.87□□□□□ -1.31
Rfx1P48377 Ryr3-210ENSMUST00000208151 15370 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Rfx1P48377 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx1P48377 AC124586.1-201ENSMUST00000221673 2795 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx1P48377 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Rfx1P48377 Olfr1357-202ENSMUST00000203305 2286 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
Rfx1P48377 Gm17473-201ENSMUST00000180585 2216 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx1P48377 Gm5653-201ENSMUST00000223393 1337 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Mir449c-201ENSMUST00000102192 109 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC6.87□□□□□ -1.31
Rfx1P48377 Gm24434-201ENSMUST00000104081 132 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Gm3940-201ENSMUST00000105087 432 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Gm12492-201ENSMUST00000117665 564 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Gm14116-201ENSMUST00000117733 805 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Gm12370-201ENSMUST00000117809 604 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Zbtb8os-202ENSMUST00000119480 527 ntTSL 5 BASIC6.87□□□□□ -1.31
Rfx1P48377 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Gm14620-201ENSMUST00000120656 383 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Vmn1r-ps135-201ENSMUST00000120909 595 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Gm7670-201ENSMUST00000121272 641 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Gm11438-201ENSMUST00000121582 189 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC6.87□□□□□ -1.31
Rfx1P48377 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC6.87□□□□□ -1.31
Rfx1P48377 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx1P48377 Gm24289-201ENSMUST00000157629 135 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Gm24965-201ENSMUST00000157922 106 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 AU023070-201ENSMUST00000176972 387 ntTSL 2 BASIC6.87□□□□□ -1.31
Rfx1P48377 Gm9892-201ENSMUST00000182415 992 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Gm29038-201ENSMUST00000191543 678 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Gm31861-201ENSMUST00000204563 672 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Gm44279-201ENSMUST00000205154 472 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Gm45366-201ENSMUST00000209828 384 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.87□□□□□ -1.31
Rfx1P48377 Gm45710-201ENSMUST00000212847 215 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 AC109212.1-201ENSMUST00000215561 427 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC6.87□□□□□ -1.31
Rfx1P48377 AC168059.1-201ENSMUST00000225846 841 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
Rfx1P48377 Gm23242-201ENSMUST00000083055 107 ntBASIC6.87□□□□□ -1.31
Rfx1P48377 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
Rfx1P48377 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx1P48377 Gm13103-201ENSMUST00000094522 1833 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx1P48377 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx1P48377 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx1P48377 Tmem56-201ENSMUST00000029777 6248 ntAPPRIS P2 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx1P48377 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
Rfx1P48377 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx1P48377 Casp8ap2-205ENSMUST00000178925 6557 ntAPPRIS P2 TSL 5 BASIC6.86□□□□□ -1.31
Rfx1P48377 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx1P48377 Gm29084-201ENSMUST00000185587 1452 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Rfx1P48377 Macf1-202ENSMUST00000084301 23398 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Rfx1P48377 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx1P48377 Xpo4-201ENSMUST00000089482 3456 ntAPPRIS ALT1 TSL 5 BASIC6.86□□□□□ -1.31
Rfx1P48377 Gm26376-201ENSMUST00000104784 110 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 Crisp4-202ENSMUST00000115340 1179 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx1P48377 Gm6429-201ENSMUST00000117144 475 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 Gm22960-201ENSMUST00000122517 104 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC6.86□□□□□ -1.31
Rfx1P48377 Vmn2r-ps111-201ENSMUST00000161565 241 ntTSL 2 BASIC6.86□□□□□ -1.31
Rfx1P48377 Gm4202-201ENSMUST00000169025 733 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 Gm25412-201ENSMUST00000180258 107 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 Mir6989-201ENSMUST00000184812 65 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Rfx1P48377 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC6.86□□□□□ -1.31
Rfx1P48377 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC6.86□□□□□ -1.31
Rfx1P48377 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC6.86□□□□□ -1.31
Rfx1P48377 1700025B11Rik-201ENSMUST00000190233 553 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx1P48377 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC6.86□□□□□ -1.31
Rfx1P48377 Gm38234-201ENSMUST00000195204 421 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 Gm43148-201ENSMUST00000198237 520 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 Gm43772-201ENSMUST00000202052 379 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC6.86□□□□□ -1.31
Rfx1P48377 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC6.86□□□□□ -1.31
Rfx1P48377 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx1P48377 AC167013.4-201ENSMUST00000226712 317 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 AC161383.1-201ENSMUST00000227356 527 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 AC166105.1-201ENSMUST00000227512 482 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx1P48377 Olfr395-201ENSMUST00000072991 939 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
Rfx1P48377 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
Rfx1P48377 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC6.86□□□□□ -1.31
Rfx1P48377 AC115891.1-201ENSMUST00000215798 1755 ntBASIC6.86□□□□□ -1.31
Rfx1P48377 Dnah3-204ENSMUST00000209154 12265 ntAPPRIS P5 TSL 5 BASIC6.86□□□□□ -1.31
Retrieved 100 of 76,532 protein–RNA pairs in 72.5 ms