Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm18903-201ENSMUST00000215343 480 ntBASIC4.55□□□□□ -1.68
HttP42859 Olfr298-202ENSMUST00000213223 3273 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
HttP42859 Cntrl-212ENSMUST00000156933 7189 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HttP42859 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HttP42859 Arhgap15-201ENSMUST00000055776 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HttP42859 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
HttP42859 Cdh23-201ENSMUST00000073242 10688 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
HttP42859 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HttP42859 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
HttP42859 P2ry14-205ENSMUST00000197220 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
HttP42859 Clec2f-201ENSMUST00000121051 374 ntBASIC4.55□□□□□ -1.68
HttP42859 Gm14603-201ENSMUST00000121275 448 ntBASIC4.55□□□□□ -1.68
HttP42859 Gm44513-201ENSMUST00000206811 439 ntBASIC4.55□□□□□ -1.68
HttP42859 Gm45533-201ENSMUST00000210295 165 ntTSL 5 BASIC4.55□□□□□ -1.68
HttP42859 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
HttP42859 Impg2-202ENSMUST00000069936 6890 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HttP42859 Gm44518-201ENSMUST00000208080 4370 ntBASIC4.54□□□□□ -1.68
HttP42859 Olfr1131-202ENSMUST00000213302 1779 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HttP42859 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HttP42859 Gm22314-201ENSMUST00000158007 281 ntBASIC4.54□□□□□ -1.68
HttP42859 Cylc2-203ENSMUST00000166749 1297 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HttP42859 Gm37898-201ENSMUST00000193781 174 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
HttP42859 CT009748.1-201ENSMUST00000216068 269 ntTSL 5 BASIC4.54□□□□□ -1.68
HttP42859 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HttP42859 Nae1-201ENSMUST00000034349 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HttP42859 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
HttP42859 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
HttP42859 Gm2974-201ENSMUST00000164512 1990 ntAPPRIS P5 TSL 5 BASIC4.54□□□□□ -1.68
HttP42859 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
HttP42859 Unc80-201ENSMUST00000061620 13613 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
HttP42859 Gm12071-201ENSMUST00000121968 469 ntBASIC4.54□□□□□ -1.68
HttP42859 Gm9294-201ENSMUST00000165198 789 ntBASIC4.54□□□□□ -1.68
HttP42859 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.54□□□□□ -1.68
HttP42859 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC4.54□□□□□ -1.68
HttP42859 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
HttP42859 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.54□□□□□ -1.68
HttP42859 AC122317.3-201ENSMUST00000219320 3524 ntBASIC4.54□□□□□ -1.68
HttP42859 Vmn1r201-202ENSMUST00000226330 4770 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
HttP42859 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
HttP42859 Nav1-202ENSMUST00000067414 13117 ntAPPRIS P2 TSL 5 BASIC4.54□□□□□ -1.68
HttP42859 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
HttP42859 Gm6445-201ENSMUST00000189515 1112 ntBASIC4.53□□□□□ -1.68
HttP42859 Gm28701-201ENSMUST00000189778 1010 ntTSL 5 BASIC4.53□□□□□ -1.68
HttP42859 Gm43217-201ENSMUST00000199513 367 ntBASIC4.53□□□□□ -1.68
HttP42859 Dnajc5g-202ENSMUST00000201740 581 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
HttP42859 AC152415.1-201ENSMUST00000213320 440 ntBASIC4.53□□□□□ -1.68
HttP42859 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
HttP42859 Gm43209-201ENSMUST00000198949 1588 ntBASIC4.53□□□□□ -1.68
HttP42859 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HttP42859 Vmn2r-ps119-201ENSMUST00000177481 2406 ntBASIC4.53□□□□□ -1.68
HttP42859 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HttP42859 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HttP42859 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
HttP42859 Gm13762-202ENSMUST00000168169 2180 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
HttP42859 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC4.53□□□□□ -1.68
HttP42859 Gm25595-201ENSMUST00000102273 97 ntBASIC4.53□□□□□ -1.68
HttP42859 Gm11911-201ENSMUST00000117938 1023 ntBASIC4.53□□□□□ -1.68
HttP42859 Olfr1292-ps1-201ENSMUST00000118137 939 ntBASIC4.53□□□□□ -1.68
HttP42859 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HttP42859 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.53□□□□□ -1.68
HttP42859 Gm29598-201ENSMUST00000188996 588 ntBASIC4.53□□□□□ -1.68
HttP42859 Gm7041-201ENSMUST00000201227 524 ntBASIC4.53□□□□□ -1.68
HttP42859 Gm44099-201ENSMUST00000203299 112 ntBASIC4.53□□□□□ -1.68
HttP42859 4930567K12Rik-201ENSMUST00000207593 1281 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
HttP42859 Rnf24-202ENSMUST00000110194 5944 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HttP42859 Ctnnd1-207ENSMUST00000111676 5852 ntTSL 5 BASIC4.53□□□□□ -1.68
HttP42859 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
HttP42859 Olfr985-202ENSMUST00000214981 1879 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
HttP42859 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.53□□□□□ -1.68
HttP42859 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.53□□□□□ -1.68
HttP42859 Gm37802-201ENSMUST00000194998 2643 ntBASIC4.53□□□□□ -1.68
HttP42859 Hmcn2-201ENSMUST00000113532 15646 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
HttP42859 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
HttP42859 Gm43766-201ENSMUST00000200590 5417 ntBASIC4.53□□□□□ -1.69
HttP42859 Gm26019-201ENSMUST00000104407 119 ntBASIC4.52□□□□□ -1.69
HttP42859 Gm26347-201ENSMUST00000157526 131 ntBASIC4.52□□□□□ -1.69
HttP42859 Vmn2r-ps132-201ENSMUST00000176738 651 ntBASIC4.52□□□□□ -1.69
HttP42859 Gm43649-201ENSMUST00000196596 391 ntBASIC4.52□□□□□ -1.69
HttP42859 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.52□□□□□ -1.69
HttP42859 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HttP42859 AC118733.1-201ENSMUST00000217387 1217 ntBASIC4.52□□□□□ -1.69
HttP42859 Zkscan7-204ENSMUST00000214957 5650 ntTSL 2 BASIC4.52□□□□□ -1.69
HttP42859 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.52□□□□□ -1.69
HttP42859 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC4.52□□□□□ -1.69
HttP42859 Foxr2-202ENSMUST00000163801 3072 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HttP42859 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.52□□□□□ -1.69
HttP42859 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.52□□□□□ -1.69
HttP42859 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HttP42859 Timm17a-201ENSMUST00000081104 7280 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
HttP42859 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
HttP42859 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC4.52□□□□□ -1.69
HttP42859 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
HttP42859 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC4.52□□□□□ -1.69
HttP42859 Gm26276-201ENSMUST00000157099 109 ntBASIC4.52□□□□□ -1.69
HttP42859 Gm10067-201ENSMUST00000179462 348 ntBASIC4.52□□□□□ -1.69
HttP42859 Gm9947-202ENSMUST00000187401 687 ntTSL 5 BASIC4.52□□□□□ -1.69
HttP42859 Gm29704-201ENSMUST00000196011 253 ntBASIC4.52□□□□□ -1.69
HttP42859 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC4.52□□□□□ -1.69
HttP42859 Gm7587-201ENSMUST00000207618 1021 ntBASIC4.52□□□□□ -1.69
HttP42859 Lrrc69-201ENSMUST00000023917 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 63.4 ms