Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC4.71□□□□□ -1.66
Cxcl12P40224 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC4.71□□□□□ -1.66
Cxcl12P40224 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.71□□□□□ -1.66
Cxcl12P40224 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cxcl12P40224 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cxcl12P40224 Olfr639-202ENSMUST00000215653 6570 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cxcl12P40224 G930045G22Rik-201ENSMUST00000101402 480 ntTSL 5 BASIC4.71□□□□□ -1.66
Cxcl12P40224 Gm24581-201ENSMUST00000103962 133 ntBASIC4.71□□□□□ -1.66
Cxcl12P40224 Gm11406-201ENSMUST00000117418 484 ntBASIC4.71□□□□□ -1.66
Cxcl12P40224 Gm14065-201ENSMUST00000120848 585 ntBASIC4.71□□□□□ -1.66
Cxcl12P40224 Gm12708-201ENSMUST00000126143 349 ntTSL 5 BASIC4.71□□□□□ -1.66
Cxcl12P40224 Gm23782-201ENSMUST00000157939 120 ntBASIC4.71□□□□□ -1.66
Cxcl12P40224 Gm24503-201ENSMUST00000158454 135 ntBASIC4.71□□□□□ -1.66
Cxcl12P40224 Stk31-202ENSMUST00000163954 2988 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Cxcl12P40224 Gm10087-201ENSMUST00000167650 330 ntBASIC4.71□□□□□ -1.66
Cxcl12P40224 1700109I08Rik-201ENSMUST00000185680 396 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cxcl12P40224 Gm18177-201ENSMUST00000188373 404 ntBASIC4.71□□□□□ -1.66
Cxcl12P40224 Ikzf2-209ENSMUST00000191262 1146 ntTSL 5 BASIC4.71□□□□□ -1.66
Cxcl12P40224 Gm4248-201ENSMUST00000196905 316 ntBASIC4.71□□□□□ -1.66
Cxcl12P40224 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC4.71□□□□□ -1.66
Cxcl12P40224 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.71□□□□□ -1.66
Cxcl12P40224 4930598N05Rik-204ENSMUST00000207733 675 ntTSL 3 BASIC4.71□□□□□ -1.66
Cxcl12P40224 Prl2c2-203ENSMUST00000221612 596 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cxcl12P40224 AC154354.1-201ENSMUST00000224585 2109 ntBASIC4.71□□□□□ -1.66
Cxcl12P40224 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
Cxcl12P40224 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
Cxcl12P40224 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC4.71□□□□□ -1.66
Cxcl12P40224 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cxcl12P40224 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
Cxcl12P40224 Gm38105-201ENSMUST00000192112 2621 ntBASIC4.71□□□□□ -1.66
Cxcl12P40224 Tor1aip1-210ENSMUST00000169241 3716 ntAPPRIS ALT2 TSL 3 BASIC4.71□□□□□ -1.66
Cxcl12P40224 Eya4-208ENSMUST00000220299 3615 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
Cxcl12P40224 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
Cxcl12P40224 A830019P07Rik-201ENSMUST00000178904 1777 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cxcl12P40224 Gm42869-201ENSMUST00000199953 2121 ntBASIC4.7□□□□□ -1.66
Cxcl12P40224 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cxcl12P40224 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cxcl12P40224 AC131586.2-202ENSMUST00000227016 2705 ntBASIC4.7□□□□□ -1.66
Cxcl12P40224 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Cxcl12P40224 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cxcl12P40224 Vmn1r6-203ENSMUST00000227131 8330 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Cxcl12P40224 Igkv1-99-201ENSMUST00000103326 359 ntAPPRIS ALT2 BASIC4.7□□□□□ -1.66
Cxcl12P40224 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cxcl12P40224 Clec4a3-202ENSMUST00000117173 1165 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cxcl12P40224 Gm12131-201ENSMUST00000117479 359 ntBASIC4.7□□□□□ -1.66
Cxcl12P40224 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC4.7□□□□□ -1.66
Cxcl12P40224 Defa-ps5-201ENSMUST00000121541 279 ntBASIC4.7□□□□□ -1.66
Cxcl12P40224 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC4.7□□□□□ -1.66
Cxcl12P40224 Gm13985-201ENSMUST00000154409 621 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cxcl12P40224 Gm25965-201ENSMUST00000157170 93 ntBASIC4.7□□□□□ -1.66
Cxcl12P40224 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.7□□□□□ -1.66
Cxcl12P40224 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.7□□□□□ -1.66
Cxcl12P40224 Gm27773-201ENSMUST00000184087 78 ntBASIC4.7□□□□□ -1.66
Cxcl12P40224 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC4.7□□□□□ -1.66
Cxcl12P40224 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cxcl12P40224 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
Cxcl12P40224 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.7□□□□□ -1.66
Cxcl12P40224 Gm42948-201ENSMUST00000199085 578 ntTSL 5 BASIC4.7□□□□□ -1.66
Cxcl12P40224 Gm45628-201ENSMUST00000210849 274 ntBASIC4.7□□□□□ -1.66
Cxcl12P40224 Gm8137-201ENSMUST00000218997 463 ntBASIC4.7□□□□□ -1.66
Cxcl12P40224 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC4.7□□□□□ -1.66
Cxcl12P40224 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.7□□□□□ -1.66
Cxcl12P40224 Gm26226-201ENSMUST00000082509 116 ntBASIC4.7□□□□□ -1.66
Cxcl12P40224 A630033H20Rik-201ENSMUST00000067249 3004 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
Cxcl12P40224 AC103672.3-201ENSMUST00000227649 3243 ntBASIC4.7□□□□□ -1.66
Cxcl12P40224 Olfr1331-203ENSMUST00000216589 3139 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
Cxcl12P40224 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC4.7□□□□□ -1.66
Cxcl12P40224 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cxcl12P40224 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Cxcl12P40224 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Olfr1302-203ENSMUST00000215244 2729 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
Cxcl12P40224 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Cxcl12P40224 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC4.69□□□□□ -1.66
Cxcl12P40224 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cxcl12P40224 Gm13712-201ENSMUST00000117484 2295 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Gin1-202ENSMUST00000112842 1037 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cxcl12P40224 Gm11631-201ENSMUST00000119220 156 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Gm13024-201ENSMUST00000121756 718 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Spin2-ps4-201ENSMUST00000126395 762 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Gm10444-201ENSMUST00000126708 148 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cxcl12P40224 Spin2-ps3-201ENSMUST00000148147 762 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Gm26490-201ENSMUST00000157879 140 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Gm17046-201ENSMUST00000168078 850 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cxcl12P40224 Gm22852-201ENSMUST00000177899 101 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Gm18828-202ENSMUST00000181035 310 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Gm27695-201ENSMUST00000184301 91 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Scgb2b6-201ENSMUST00000188132 330 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Gm37220-201ENSMUST00000195179 415 ntTSL 5 BASIC4.69□□□□□ -1.66
Cxcl12P40224 Gm44054-201ENSMUST00000203814 372 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Olfr1315-ps1-201ENSMUST00000207542 1230 ntAPPRIS P5 TSL 5 BASIC4.69□□□□□ -1.66
Cxcl12P40224 Gm45343-201ENSMUST00000210452 828 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
Cxcl12P40224 AC154296.3-201ENSMUST00000214427 712 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 AC125539.1-202ENSMUST00000226449 670 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 AC154738.5-201ENSMUST00000227397 310 ntBASIC4.69□□□□□ -1.66
Cxcl12P40224 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
Cxcl12P40224 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
Retrieved 100 of 76,532 protein–RNA pairs in 59.6 ms