Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
Traf1P39428 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Traf1P39428 Ttn-202ENSMUST00000099980 16891 ntTSL 5 BASIC5.61□□□□□ -1.51
Traf1P39428 Tmem72-201ENSMUST00000056623 17152 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Traf1P39428 AC115034.1-201ENSMUST00000215393 3846 ntBASIC5.61□□□□□ -1.51
Traf1P39428 AC156632.1-201ENSMUST00000220626 3845 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.61□□□□□ -1.51
Traf1P39428 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Traf1P39428 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Traf1P39428 Gm13250-201ENSMUST00000117209 753 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Gm13195-201ENSMUST00000117229 261 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Gm12328-201ENSMUST00000118611 197 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Gm5754-201ENSMUST00000118774 892 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Gm15267-201ENSMUST00000120888 464 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Gm11965-201ENSMUST00000122017 277 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Gm7840-201ENSMUST00000122086 533 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Gm24371-201ENSMUST00000122662 267 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Gm17430-201ENSMUST00000171339 474 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Traf1P39428 Rps11-ps1-201ENSMUST00000171632 475 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Traf1P39428 Gm27315-201ENSMUST00000183977 154 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Traf1P39428 Gm6546-201ENSMUST00000192096 766 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Gm36983-201ENSMUST00000192280 1102 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Gm37243-201ENSMUST00000193407 595 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Gm43136-201ENSMUST00000200403 636 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Gm6261-201ENSMUST00000204707 760 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Gm45689-201ENSMUST00000210522 133 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC5.61□□□□□ -1.51
Traf1P39428 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Traf1P39428 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC5.61□□□□□ -1.51
Traf1P39428 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.61□□□□□ -1.51
Traf1P39428 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.61□□□□□ -1.51
Traf1P39428 AC165092.2-201ENSMUST00000224681 368 ntBASIC5.61□□□□□ -1.51
Traf1P39428 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Traf1P39428 Vmn1r226-201ENSMUST00000061756 897 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Traf1P39428 Vmn1r215-201ENSMUST00000072972 1048 ntAPPRIS P1 BASIC5.61□□□□□ -1.51
Traf1P39428 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Traf1P39428 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Traf1P39428 Adgrv1-201ENSMUST00000095585 19338 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
Traf1P39428 Olfr1270-205ENSMUST00000216354 4836 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Traf1P39428 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC5.61□□□□□ -1.51
Traf1P39428 BC003331-204ENSMUST00000097547 2851 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
Traf1P39428 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Traf1P39428 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Traf1P39428 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
Traf1P39428 AI481877-201ENSMUST00000107547 4664 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Traf1P39428 Gm30332-201ENSMUST00000204221 2345 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Traf1P39428 Gm45129-201ENSMUST00000208444 2224 ntBASIC5.6□□□□□ -1.51
Traf1P39428 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Traf1P39428 Zfp62-201ENSMUST00000061757 3852 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Traf1P39428 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Traf1P39428 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
Traf1P39428 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC5.6□□□□□ -1.51
Traf1P39428 Csn3-202ENSMUST00000113267 1258 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Traf1P39428 Gm12285-201ENSMUST00000117347 233 ntBASIC5.6□□□□□ -1.51
Traf1P39428 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC5.6□□□□□ -1.51
Traf1P39428 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Traf1P39428 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Traf1P39428 Esp36-201ENSMUST00000172814 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Traf1P39428 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Traf1P39428 Esp36-202ENSMUST00000177882 1117 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
Traf1P39428 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC5.6□□□□□ -1.51
Traf1P39428 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC5.6□□□□□ -1.51
Traf1P39428 Gm26683-201ENSMUST00000181737 470 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
Traf1P39428 Gm8614-201ENSMUST00000182528 978 ntBASIC5.6□□□□□ -1.51
Traf1P39428 Gm4412-201ENSMUST00000186660 433 ntBASIC5.6□□□□□ -1.51
Traf1P39428 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC5.6□□□□□ -1.51
Traf1P39428 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.6□□□□□ -1.51
Traf1P39428 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.6□□□□□ -1.51
Traf1P39428 Gm42663-201ENSMUST00000199883 351 ntBASIC5.6□□□□□ -1.51
Traf1P39428 Gm44259-201ENSMUST00000204996 298 ntBASIC5.6□□□□□ -1.51
Traf1P39428 Gm44816-201ENSMUST00000206666 477 ntBASIC5.6□□□□□ -1.51
Traf1P39428 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC5.6□□□□□ -1.51
Traf1P39428 Gm7128-201ENSMUST00000211639 533 ntBASIC5.6□□□□□ -1.51
Traf1P39428 Gm18363-201ENSMUST00000221671 730 ntBASIC5.6□□□□□ -1.51
Traf1P39428 AC164424.1-201ENSMUST00000221690 170 ntBASIC5.6□□□□□ -1.51
Traf1P39428 AC139294.2-201ENSMUST00000227159 285 ntBASIC5.6□□□□□ -1.51
Traf1P39428 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Traf1P39428 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Traf1P39428 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
Traf1P39428 Nfyc-202ENSMUST00000097906 1008 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Traf1P39428 Olfr1012-203ENSMUST00000214958 3076 ntAPPRIS P1 TSL 3 BASIC5.6□□□□□ -1.51
Traf1P39428 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
Traf1P39428 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.6□□□□□ -1.51
Traf1P39428 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.51
Traf1P39428 Gm37588-201ENSMUST00000195024 2496 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5.59□□□□□ -1.51
Traf1P39428 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5.59□□□□□ -1.51
Traf1P39428 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5.59□□□□□ -1.51
Traf1P39428 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Traf1P39428 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Traf1P39428 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.59□□□□□ -1.51
Traf1P39428 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Traf1P39428 Lpp-202ENSMUST00000078988 15440 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Traf1P39428 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Traf1P39428 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
Traf1P39428 Gm11633-201ENSMUST00000118176 444 ntBASIC5.59□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 62 ms