Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Nxf2-201ENSMUST00000010085 2393 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 Il31ra-201ENSMUST00000051756 3680 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Vmn1r171-209ENSMUST00000228228 2863 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
LdlrP35951 Gm20756-202ENSMUST00000201324 1565 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 Cept1-201ENSMUST00000039153 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
LdlrP35951 Vmn1r171-213ENSMUST00000228681 2633 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
LdlrP35951 Zkscan8-204ENSMUST00000224362 6954 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
LdlrP35951 Gm13928-201ENSMUST00000120326 1732 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Enpp2-203ENSMUST00000171545 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 Lrrc9-206ENSMUST00000162159 4739 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 Pum2-210ENSMUST00000169089 3295 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
LdlrP35951 Ptprq-201ENSMUST00000050702 7393 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
LdlrP35951 Igkv11-125-201ENSMUST00000103311 350 ntAPPRIS ALT2 BASIC5.38□□□□□ -1.55
LdlrP35951 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LdlrP35951 Cep112-203ENSMUST00000106718 839 ntTSL 5 BASIC5.38□□□□□ -1.55
LdlrP35951 Gm13728-201ENSMUST00000117471 400 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm11854-201ENSMUST00000117839 446 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm12985-201ENSMUST00000118376 183 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm13679-201ENSMUST00000118678 484 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm15157-201ENSMUST00000121852 702 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm24517-201ENSMUST00000122560 107 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm16208-201ENSMUST00000128476 471 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 Amy2a1-201ENSMUST00000132353 890 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
LdlrP35951 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC5.38□□□□□ -1.55
LdlrP35951 Gm25846-201ENSMUST00000158013 135 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm26159-201ENSMUST00000158968 104 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm17154-201ENSMUST00000165748 431 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm17177-201ENSMUST00000169144 483 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm5139-201ENSMUST00000175943 249 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LdlrP35951 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LdlrP35951 Gm27225-201ENSMUST00000183833 557 ntBASIC5.38□□□□□ -1.55
LdlrP35951 4930519F24Rik-201ENSMUST00000185764 579 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 Ly6a-203ENSMUST00000187171 853 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 Gm29138-201ENSMUST00000191444 348 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm42622-201ENSMUST00000197229 355 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm43444-201ENSMUST00000198123 291 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm38670-201ENSMUST00000199248 77 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm44952-201ENSMUST00000204443 433 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.38□□□□□ -1.55
LdlrP35951 Gm10709-201ENSMUST00000213318 480 ntBASIC5.38□□□□□ -1.55
LdlrP35951 AC166263.1-201ENSMUST00000218586 238 ntBASIC5.38□□□□□ -1.55
LdlrP35951 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC5.38□□□□□ -1.55
LdlrP35951 AC140209.1-204ENSMUST00000226736 739 ntBASIC5.38□□□□□ -1.55
LdlrP35951 BC049715-201ENSMUST00000052702 1120 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 Vmn1r236-201ENSMUST00000066998 1121 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
LdlrP35951 Gm3383-202ENSMUST00000112758 1813 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
LdlrP35951 Gm3194-202ENSMUST00000180867 1813 ntAPPRIS P5 TSL 5 BASIC5.38□□□□□ -1.55
LdlrP35951 Olfr1480-202ENSMUST00000207093 1819 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LdlrP35951 AC158982.1-205ENSMUST00000227339 1876 ntBASIC5.38□□□□□ -1.55
LdlrP35951 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
LdlrP35951 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
LdlrP35951 Ppm1k-201ENSMUST00000042766 5560 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 9330159M07Rik-201ENSMUST00000180712 2702 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 Olfr1505-202ENSMUST00000216623 3567 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LdlrP35951 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LdlrP35951 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.37□□□□□ -1.55
LdlrP35951 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.37□□□□□ -1.55
LdlrP35951 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
LdlrP35951 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.37□□□□□ -1.55
LdlrP35951 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
LdlrP35951 Gm7754-201ENSMUST00000223075 2064 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
LdlrP35951 Gm6884-201ENSMUST00000119318 615 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Gm12433-201ENSMUST00000119659 255 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Gm12873-201ENSMUST00000119988 422 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LdlrP35951 Gm6175-201ENSMUST00000121351 400 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Snrpert-201ENSMUST00000121967 279 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Gm11965-201ENSMUST00000122017 277 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Gm11197-201ENSMUST00000145158 839 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Gm15892-201ENSMUST00000152627 439 ntTSL 2 BASIC5.37□□□□□ -1.55
LdlrP35951 4930548K13Rik-201ENSMUST00000154459 561 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
LdlrP35951 Gm26172-201ENSMUST00000158421 134 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
LdlrP35951 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Sult2a4-202ENSMUST00000165167 964 ntAPPRIS P2 TSL 5 BASIC5.37□□□□□ -1.55
LdlrP35951 Vmn1r-ps22-201ENSMUST00000176017 900 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Gm21698-201ENSMUST00000178487 666 ntTSL 5 BASIC5.37□□□□□ -1.55
LdlrP35951 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.37□□□□□ -1.55
LdlrP35951 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC5.37□□□□□ -1.55
LdlrP35951 Gm37946-201ENSMUST00000192064 347 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Gm6057-201ENSMUST00000195927 314 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Gm43175-201ENSMUST00000198450 3810 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Gm43344-201ENSMUST00000198723 1229 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Gm42818-201ENSMUST00000198869 987 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Mir6994-201ENSMUST00000198985 73 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Gm43794-201ENSMUST00000200971 692 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Gm2762-204ENSMUST00000201815 537 ntTSL 3 BASIC5.37□□□□□ -1.55
LdlrP35951 Gm44449-201ENSMUST00000203610 153 ntBASIC5.37□□□□□ -1.55
LdlrP35951 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC5.37□□□□□ -1.55
LdlrP35951 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.37□□□□□ -1.55
LdlrP35951 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC5.37□□□□□ -1.55
LdlrP35951 4933411E02Rik-201ENSMUST00000216779 1030 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 64.7 ms