Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Mir6412-201ENSMUST00000184477 97 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Gm3604-202ENSMUST00000187656 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Lire1P11260 Gm5252-201ENSMUST00000189030 909 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Gm17967-201ENSMUST00000195319 647 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Gm37505-201ENSMUST00000195670 461 ntTSL 5 BASIC4.93□□□□□ -1.62
Lire1P11260 Ccna2-205ENSMUST00000196316 2001 ntTSL 5 BASIC4.93□□□□□ -1.62
Lire1P11260 Gm32754-202ENSMUST00000199504 480 ntTSL 5 BASIC4.93□□□□□ -1.62
Lire1P11260 Csn1s2a-209ENSMUST00000200322 797 ntAPPRIS ALT2 TSL 2 BASIC4.93□□□□□ -1.62
Lire1P11260 Gm43794-201ENSMUST00000200971 692 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Gm42850-201ENSMUST00000202094 201 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Gm43920-201ENSMUST00000204953 2159 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Lire1P11260 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Gm45034-201ENSMUST00000206831 482 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Gm45160-201ENSMUST00000207112 3099 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC4.93□□□□□ -1.62
Lire1P11260 Gm45189-201ENSMUST00000208567 363 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Lire1P11260 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC4.93□□□□□ -1.62
Lire1P11260 AC102815.1-201ENSMUST00000226662 1061 ntBASIC4.93□□□□□ -1.62
Lire1P11260 AC117202.1-201ENSMUST00000227007 445 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Sprr2d-201ENSMUST00000047477 681 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Lire1P11260 Gm7887-201ENSMUST00000056948 537 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Gm24144-201ENSMUST00000082632 111 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Olfr111-201ENSMUST00000097325 1041 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Lire1P11260 Spink13-201ENSMUST00000097557 796 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Lire1P11260 Gpr65-201ENSMUST00000075072 2069 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Lire1P11260 Abcc2-202ENSMUST00000099413 1926 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Dcn-201ENSMUST00000105287 1758 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Lire1P11260 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Lire1P11260 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Lire1P11260 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Fbxw24-201ENSMUST00000073962 1488 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Lire1P11260 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Lire1P11260 Uba6-201ENSMUST00000039373 6590 ntAPPRIS P2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Lire1P11260 Zfp951-201ENSMUST00000089906 1356 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm43913-201ENSMUST00000203924 3029 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lire1P11260 Svet1-201ENSMUST00000209370 3940 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lire1P11260 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC4.92□□□□□ -1.62
Lire1P11260 Cbx3-ps3-201ENSMUST00000118595 550 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Gm14776-201ENSMUST00000121029 887 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Gm12978-201ENSMUST00000121250 522 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Gm13610-201ENSMUST00000128298 951 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lire1P11260 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lire1P11260 Gm14216-202ENSMUST00000155334 492 ntTSL 2 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm22916-201ENSMUST00000157616 119 ntBASIC4.92□□□□□ -1.62
Lire1P11260 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lire1P11260 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC4.92□□□□□ -1.62
Lire1P11260 Ear-ps7-201ENSMUST00000161287 442 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lire1P11260 Gm17075-201ENSMUST00000171924 670 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Vmn1r-ps40-201ENSMUST00000172862 343 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Gm18354-201ENSMUST00000173515 1068 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Vmn2r-ps64-201ENSMUST00000173690 523 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Gm25019-201ENSMUST00000179732 110 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Snhg6-205ENSMUST00000182819 816 ntTSL 2 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm27952-201ENSMUST00000184748 105 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Gm27781-201ENSMUST00000185185 92 ntBASIC4.92□□□□□ -1.62
Lire1P11260 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm29484-201ENSMUST00000186067 324 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Gm28319-201ENSMUST00000189560 226 ntTSL 5 BASIC4.92□□□□□ -1.62
Lire1P11260 Ighv1-19-1-201ENSMUST00000192823 351 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Ighv1-35-201ENSMUST00000195265 351 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Gm33952-201ENSMUST00000197795 408 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC4.92□□□□□ -1.62
Lire1P11260 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm7435-201ENSMUST00000214039 486 ntTSL 2 BASIC4.92□□□□□ -1.62
Lire1P11260 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm19174-201ENSMUST00000216944 956 ntBASIC4.92□□□□□ -1.62
Lire1P11260 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm46430-203ENSMUST00000221389 1049 ntTSL 5 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm19189-201ENSMUST00000221689 754 ntBASIC4.92□□□□□ -1.62
Lire1P11260 AC164315.1-201ENSMUST00000226452 708 ntBASIC4.92□□□□□ -1.62
Lire1P11260 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Gm26176-201ENSMUST00000083795 105 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Olfr625-ps1-201ENSMUST00000098195 966 ntAPPRIS P5 BASIC4.92□□□□□ -1.62
Lire1P11260 Wfdc9-201ENSMUST00000099095 252 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Lire1P11260 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lire1P11260 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Lire1P11260 9230019H11Rik-201ENSMUST00000095874 2801 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
Lire1P11260 Gm28999-201ENSMUST00000188063 1498 ntTSL 5 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm28393-201ENSMUST00000191261 1498 ntTSL 5 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm38168-201ENSMUST00000191717 1493 ntTSL 5 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm37572-202ENSMUST00000194043 1493 ntTSL 5 BASIC4.92□□□□□ -1.62
Lire1P11260 Gm8989-201ENSMUST00000184782 7275 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Gm20287-201ENSMUST00000172848 2367 ntBASIC4.92□□□□□ -1.62
Lire1P11260 Ccdc152-202ENSMUST00000226261 1327 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Lire1P11260 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
Lire1P11260 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Lire1P11260 Apob-202ENSMUST00000037811 13934 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Lire1P11260 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC4.91□□□□□ -1.62
Lire1P11260 Mcmdc2-204ENSMUST00000140948 3249 ntTSL 5 BASIC4.91□□□□□ -1.62
Lire1P11260 Vmn1r189-203ENSMUST00000228428 3231 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 88 ms