Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Hmgb3O54879 Vsig4-201ENSMUST00000050707 1432 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Hmgb3O54879 Olfr907-203ENSMUST00000214264 1910 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Hmgb3O54879 Macc1-204ENSMUST00000222058 4193 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm28687-201ENSMUST00000187203 1494 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm29373-201ENSMUST00000190660 1494 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm7195-201ENSMUST00000190869 1707 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm43705-201ENSMUST00000195958 3717 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm38010-201ENSMUST00000192592 2784 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC3.62□□□□□ -1.83
Hmgb3O54879 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm12465-201ENSMUST00000118591 300 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm13902-201ENSMUST00000120168 605 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm16471-201ENSMUST00000121940 618 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm8061-201ENSMUST00000122380 350 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm23539-201ENSMUST00000157537 224 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm10319-202ENSMUST00000159439 846 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm15810-201ENSMUST00000160241 681 ntTSL 3 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm20428-201ENSMUST00000174365 283 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm26828-201ENSMUST00000180640 172 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Cox6b2-208ENSMUST00000183971 401 ntTSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm27409-201ENSMUST00000184727 80 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 1700029E06Rik-201ENSMUST00000189036 757 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm37867-201ENSMUST00000192066 1059 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm6546-201ENSMUST00000192096 766 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Mir7682-201ENSMUST00000198467 58 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Mir6906-201ENSMUST00000198998 58 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm19908-201ENSMUST00000204684 391 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm33601-201ENSMUST00000210001 961 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm38574-201ENSMUST00000211855 640 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 AC154592.1-201ENSMUST00000225784 574 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Olfr768-201ENSMUST00000063031 939 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Cox6b2-201ENSMUST00000063324 553 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Hmgb3O54879 Olfr190-201ENSMUST00000071243 924 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm23875-201ENSMUST00000083711 318 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Hmgb3O54879 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm38240-201ENSMUST00000195110 2487 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Gm7451-201ENSMUST00000208382 1392 ntBASIC3.62□□□□□ -1.83
Hmgb3O54879 Zfp11-201ENSMUST00000049778 3929 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Hmgb3O54879 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC3.62□□□□□ -1.83
Hmgb3O54879 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 AC124446.1-201ENSMUST00000221027 2644 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Hmgb3O54879 Tmem71-201ENSMUST00000048372 2988 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hmgb3O54879 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Hmgb3O54879 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Hmgb3O54879 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm23709-201ENSMUST00000104364 130 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Macrod2-203ENSMUST00000110061 887 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm15553-201ENSMUST00000118757 430 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm8051-201ENSMUST00000120464 466 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Olfr1274-ps-201ENSMUST00000120681 1035 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm13533-201ENSMUST00000121104 177 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm14500-201ENSMUST00000121647 113 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm12278-201ENSMUST00000153718 407 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm17159-201ENSMUST00000169043 482 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Mir7687-201ENSMUST00000184722 59 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm37601-201ENSMUST00000194922 394 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm43054-201ENSMUST00000199495 884 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm44543-201ENSMUST00000209136 396 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm45660-201ENSMUST00000210267 151 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Gm46192-201ENSMUST00000217894 326 ntBASIC3.61□□□□□ -1.83
Hmgb3O54879 Olfr1323-201ENSMUST00000057071 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Hmgb3O54879 Olfr307-201ENSMUST00000069279 1012 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 113.4 ms