Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Gm13212-203ENSMUST00000119718 2498 ntTSL 5 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Vmn2r113-201ENSMUST00000170322 2571 ntAPPRIS P1 TSL 1 (best) BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Fbxl13-202ENSMUST00000115234 2143 ntTSL 5 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Ptprd-218ENSMUST00000174180 5694 ntTSL 5 BASIC4.92□□□□□ -1.62
Scn3aA2ASI5 Znrd1-201ENSMUST00000113669 742 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm8129-201ENSMUST00000118230 213 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm25447-201ENSMUST00000158997 128 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm28064-201ENSMUST00000185639 858 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm44523-201ENSMUST00000205616 417 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm45845-201ENSMUST00000207326 582 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 CAAA01216754.4-203ENSMUST00000217178 1097 ntTSL 5 BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 n-R5s160-201ENSMUST00000083096 120 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Mir26a-2-201ENSMUST00000083496 84 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Olfr1090-201ENSMUST00000099875 942 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm7173-201ENSMUST00000101410 2832 ntAPPRIS P4 TSL 5 BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 AC102847.2-201ENSMUST00000227799 2906 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Olfr733-203ENSMUST00000214756 3640 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 P2ry12-203ENSMUST00000196583 2344 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm42946-201ENSMUST00000196108 2570 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm15350-201ENSMUST00000135138 569 ntTSL 2 BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm25908-201ENSMUST00000157624 98 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm7449-201ENSMUST00000194393 663 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm43853-201ENSMUST00000197162 301 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm17780-201ENSMUST00000207142 612 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm18891-201ENSMUST00000216734 1087 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 AC160756.1-201ENSMUST00000227266 235 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Olfr682-ps1-201ENSMUST00000071242 934 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Rps26-ps1-201ENSMUST00000077208 449 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Olfr338-202ENSMUST00000091006 921 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Cts6-201ENSMUST00000021890 1356 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 AC115910.1-201ENSMUST00000221188 4275 ntBASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Olfr308-202ENSMUST00000214977 4991 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
Scn3aA2ASI5 Gm42876-201ENSMUST00000196989 3215 ntBASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Wnk3-206ENSMUST00000184730 5253 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm13785-201ENSMUST00000119099 690 ntBASIC4.9□□□□□ -1.62
Scn3aA2ASI5 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Il18-202ENSMUST00000180021 702 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm38150-201ENSMUST00000192996 452 ntBASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm37734-201ENSMUST00000194294 621 ntTSL 5 BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm36941-202ENSMUST00000194799 621 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm37378-202ENSMUST00000195795 621 ntTSL 5 BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm37130-202ENSMUST00000195874 621 ntTSL 5 BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm43005-201ENSMUST00000199015 648 ntBASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm44023-201ENSMUST00000203710 469 ntBASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm45171-201ENSMUST00000206360 736 ntBASIC4.9□□□□□ -1.62
Scn3aA2ASI5 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Il18-201ENSMUST00000059081 702 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm25134-201ENSMUST00000082646 160 ntBASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm26165-201ENSMUST00000083791 138 ntBASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Ctsm-201ENSMUST00000099451 1457 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm17101-201ENSMUST00000169520 1588 ntBASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Gm15592-201ENSMUST00000143135 1707 ntTSL 3 BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC4.9□□□□□ -1.62
Scn3aA2ASI5 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
Scn3aA2ASI5 Olfr470-203ENSMUST00000220193 3080 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Scn3aA2ASI5 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.9□□□□□ -1.63
Scn3aA2ASI5 Gm43870-201ENSMUST00000205102 4369 ntBASIC4.9□□□□□ -1.63
Scn3aA2ASI5 4932414N04Rik-204ENSMUST00000128259 3645 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Scn3aA2ASI5 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.9□□□□□ -1.63
Scn3aA2ASI5 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
Scn3aA2ASI5 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Scn3aA2ASI5 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
Scn3aA2ASI5 Olfr1271-202ENSMUST00000216383 6613 ntAPPRIS P1 TSL 3 BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Gm24788-201ENSMUST00000104283 156 ntBASIC4.89□□□□□ -1.63
Scn3aA2ASI5 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Scn3aA2ASI5 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms