Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Gm23964-201ENSMUST00000157966 107 ntBASIC4.59□□□□□ -1.67
Scn1aA2APX8 Gm1992-201ENSMUST00000161581 250 ntTSL 3 BASIC4.59□□□□□ -1.67
Scn1aA2APX8 Gm6214-201ENSMUST00000178845 541 ntBASIC4.59□□□□□ -1.67
Scn1aA2APX8 AC159297.1-201ENSMUST00000218689 290 ntBASIC4.59□□□□□ -1.67
Scn1aA2APX8 AC166056.1-201ENSMUST00000223139 441 ntTSL 5 BASIC4.59□□□□□ -1.67
Scn1aA2APX8 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC4.59□□□□□ -1.67
Scn1aA2APX8 Prl3d1-202ENSMUST00000225330 866 ntAPPRIS P2 BASIC4.59□□□□□ -1.67
Scn1aA2APX8 BC028528-201ENSMUST00000036360 752 ntAPPRIS ALT2 TSL 1 (best) BASIC4.59□□□□□ -1.67
Scn1aA2APX8 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Scn1aA2APX8 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Scn1aA2APX8 Olfr753-ps1-203ENSMUST00000208970 2764 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Scn1aA2APX8 Serpinb9g-201ENSMUST00000081927 1927 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.68
Scn1aA2APX8 Macf1-204ENSMUST00000106213 18957 ntTSL 5 BASIC4.59□□□□□ -1.68
Scn1aA2APX8 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC4.59□□□□□ -1.68
Scn1aA2APX8 Nptn-205ENSMUST00000176250 4531 ntTSL 1 (best) BASIC4.59□□□□□ -1.68
Scn1aA2APX8 Olfr904-202ENSMUST00000216724 5197 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Scn1aA2APX8 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 6030471H07Rik-201ENSMUST00000125884 492 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Mir5106-201ENSMUST00000174936 73 ntBASIC4.58□□□□□ -1.68
Scn1aA2APX8 Mir6899-201ENSMUST00000184798 64 ntBASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm43586-201ENSMUST00000195948 310 ntBASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm43015-201ENSMUST00000199087 565 ntBASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm18306-201ENSMUST00000207338 569 ntBASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm7093-201ENSMUST00000223004 581 ntBASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Olfr1109-201ENSMUST00000099863 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm37262-201ENSMUST00000192816 1818 ntBASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.58□□□□□ -1.68
Scn1aA2APX8 Vmn1r52-202ENSMUST00000226520 3125 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Cylc1-202ENSMUST00000210720 1969 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Vmn2r38-201ENSMUST00000108554 3663 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Mapk10-204ENSMUST00000112848 6761 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Cpa6-201ENSMUST00000035577 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Scn1aA2APX8 AC124446.1-201ENSMUST00000221027 2644 ntBASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm12067-201ENSMUST00000119755 1148 ntBASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm14516-201ENSMUST00000120012 252 ntBASIC4.58□□□□□ -1.68
Scn1aA2APX8 Ugt2a2-202ENSMUST00000144144 929 ntTSL 2 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm26362-201ENSMUST00000158865 315 ntBASIC4.58□□□□□ -1.68
Scn1aA2APX8 Vmn1r166-201ENSMUST00000164045 921 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm8453-201ENSMUST00000167253 921 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm4498-201ENSMUST00000168580 921 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Vmn1r118-201ENSMUST00000172322 921 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm8693-201ENSMUST00000178871 921 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Vmn1r138-201ENSMUST00000179206 921 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Vmn1r131-201ENSMUST00000179390 921 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Vmn1r111-201ENSMUST00000179511 921 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm28181-201ENSMUST00000191460 687 ntTSL 3 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm44038-201ENSMUST00000203952 889 ntBASIC4.58□□□□□ -1.68
Scn1aA2APX8 Gm8556-201ENSMUST00000210437 664 ntBASIC4.58□□□□□ -1.68
Scn1aA2APX8 AC119241.1-201ENSMUST00000223651 534 ntBASIC4.58□□□□□ -1.68
Scn1aA2APX8 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
Scn1aA2APX8 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 AC107232.1-201ENSMUST00000227785 1503 ntBASIC4.57□□□□□ -1.68
Scn1aA2APX8 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 AC159188.2-201ENSMUST00000224103 1301 ntBASIC4.57□□□□□ -1.68
Scn1aA2APX8 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Nebl-202ENSMUST00000124270 8079 ntTSL 5 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Olfr586-204ENSMUST00000215304 6169 ntAPPRIS ALT2 TSL 5 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Gm7834-201ENSMUST00000117560 437 ntBASIC4.57□□□□□ -1.68
Scn1aA2APX8 Gm12252-201ENSMUST00000119517 219 ntBASIC4.57□□□□□ -1.68
Scn1aA2APX8 Gm5942-201ENSMUST00000120046 439 ntBASIC4.57□□□□□ -1.68
Scn1aA2APX8 Mir3473f-201ENSMUST00000183743 136 ntBASIC4.57□□□□□ -1.68
Scn1aA2APX8 Gm9320-201ENSMUST00000184151 473 ntBASIC4.57□□□□□ -1.68
Scn1aA2APX8 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Fbxw23-201ENSMUST00000198015 425 ntTSL 2 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Gm43730-201ENSMUST00000199863 372 ntBASIC4.57□□□□□ -1.68
Scn1aA2APX8 8030487O14Rik-201ENSMUST00000200244 903 ntBASIC4.57□□□□□ -1.68
Scn1aA2APX8 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Vmn2r-ps61-201ENSMUST00000207286 889 ntBASIC4.57□□□□□ -1.68
Scn1aA2APX8 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.57□□□□□ -1.68
Scn1aA2APX8 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Gm10115-201ENSMUST00000076071 1228 ntBASIC4.57□□□□□ -1.68
Scn1aA2APX8 Brip1-201ENSMUST00000044423 6931 ntAPPRIS P1 TSL 1 (best) BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Olfr231-202ENSMUST00000214446 5204 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Olfr1500-201ENSMUST00000067670 2092 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Gm38190-201ENSMUST00000192350 4755 ntBASIC4.57□□□□□ -1.68
Scn1aA2APX8 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Gm43059-201ENSMUST00000202437 1388 ntBASIC4.57□□□□□ -1.68
Scn1aA2APX8 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC4.57□□□□□ -1.68
Scn1aA2APX8 Gm23481-201ENSMUST00000104173 131 ntBASIC4.56□□□□□ -1.68
Scn1aA2APX8 Gm11398-201ENSMUST00000120330 320 ntBASIC4.56□□□□□ -1.68
Scn1aA2APX8 Gm15120-201ENSMUST00000120602 301 ntBASIC4.56□□□□□ -1.68
Scn1aA2APX8 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
Scn1aA2APX8 Gm22214-201ENSMUST00000157563 172 ntBASIC4.56□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 63.7 ms