Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm10377-201ENSMUST00000100695 899 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm3676-201ENSMUST00000111869 899 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm3543-201ENSMUST00000111870 899 ntAPPRIS P1 TSL 3 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm12444-201ENSMUST00000121512 877 ntBASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm5353-201ENSMUST00000139800 793 ntBASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm11680-201ENSMUST00000146550 439 ntTSL 5 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm16545-201ENSMUST00000161968 463 ntBASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm3573-201ENSMUST00000168673 898 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm10376-202ENSMUST00000169756 900 ntAPPRIS P5 TSL 1 (best) BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm21850-201ENSMUST00000179792 359 ntBASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm26950-201ENSMUST00000182734 498 ntBASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm27165-201ENSMUST00000183951 232 ntBASIC4.53□□□□□ -1.68
H2afb2S4R1M3 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm9687-201ENSMUST00000189312 602 ntBASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm37473-201ENSMUST00000195079 674 ntTSL 5 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 2400006E01Rik-203ENSMUST00000199633 643 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 1110060G06Rik-201ENSMUST00000200372 499 ntBASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm6719-201ENSMUST00000202067 335 ntBASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm45052-201ENSMUST00000206457 405 ntTSL 2 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm17779-201ENSMUST00000213395 394 ntBASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 CAAA01216754.4-201ENSMUST00000216416 802 ntTSL 5 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 AC154627.2-201ENSMUST00000227028 4669 ntBASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm7117-201ENSMUST00000071515 387 ntBASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm7676-201ENSMUST00000084055 319 ntBASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Zfp352-201ENSMUST00000080541 1656 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Adam7-201ENSMUST00000022640 3469 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Olfr1056-202ENSMUST00000216547 2213 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
H2afb2S4R1M3 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm5925-201ENSMUST00000105016 1497 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm5117-201ENSMUST00000178878 2553 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm24117-201ENSMUST00000103973 133 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm22899-201ENSMUST00000104540 131 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm12073-201ENSMUST00000117382 524 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm12760-201ENSMUST00000117861 482 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm12571-201ENSMUST00000118132 243 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm15445-201ENSMUST00000146700 603 ntTSL 5 BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm24636-201ENSMUST00000158673 288 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm6904-201ENSMUST00000168702 898 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Vmn1r-ps55-201ENSMUST00000174634 392 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm22355-201ENSMUST00000175531 96 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Mir7020-201ENSMUST00000183787 70 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm28976-201ENSMUST00000188070 144 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm20830-202ENSMUST00000190426 1221 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm18529-201ENSMUST00000193025 1257 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm37070-201ENSMUST00000193272 460 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 4930599N24Rik-201ENSMUST00000198822 1003 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm44006-201ENSMUST00000204273 396 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm8319-201ENSMUST00000205708 641 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm6980-201ENSMUST00000214327 1003 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Olfr1233-204ENSMUST00000216561 1192 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm3213-201ENSMUST00000219296 441 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 RMST_1.1-212ENSMUST00000220192 413 ntTSL 3 BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 AC125190.2-201ENSMUST00000221160 497 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm3086-202ENSMUST00000221248 310 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 CT954323.2-201ENSMUST00000222056 213 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Olfr812-201ENSMUST00000057775 1043 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm16415-201ENSMUST00000080097 489 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm10916-201ENSMUST00000080330 483 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Obp1b-201ENSMUST00000088198 797 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Olfr1167-202ENSMUST00000216951 4276 ntAPPRIS P1 TSL 5 BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.52□□□□□ -1.69
H2afb2S4R1M3 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.51□□□□□ -1.69
H2afb2S4R1M3 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
H2afb2S4R1M3 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
H2afb2S4R1M3 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
H2afb2S4R1M3 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 93.3 ms