Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 AC159252.1-201ENSMUST00000224450 553 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 AL589742.1-201ENSMUST00000226034 349 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Olfr803-201ENSMUST00000056736 927 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm24166-201ENSMUST00000082724 135 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Gm22971-201ENSMUST00000083305 97 ntBASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Akap6-201ENSMUST00000095737 14847 ntAPPRIS P2 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Vmn1r72-203ENSMUST00000227010 6279 ntAPPRIS P1 BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Ccnb3-202ENSMUST00000115752 4554 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
Trim3Q9R1R2 Mmp12-203ENSMUST00000120655 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm2033-201ENSMUST00000210753 2287 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Elavl4-204ENSMUST00000106598 3997 ntAPPRIS ALT1 TSL 5 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Btbd35f28-201ENSMUST00000105015 1960 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Btbd35f18-201ENSMUST00000105019 1960 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Btbd35f11-201ENSMUST00000105020 1960 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm5746-201ENSMUST00000183550 2200 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Vmn1r90-207ENSMUST00000227692 7101 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Smim8-202ENSMUST00000108131 892 ntAPPRIS P1 TSL 3 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm8145-201ENSMUST00000118220 745 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm11196-201ENSMUST00000119052 395 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm11631-201ENSMUST00000119220 156 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm13213-201ENSMUST00000119668 474 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm25806-201ENSMUST00000122782 122 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm13599-201ENSMUST00000134476 678 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm13330-201ENSMUST00000136400 388 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm26310-201ENSMUST00000157766 117 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm8214-201ENSMUST00000172123 351 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm21991-201ENSMUST00000180006 508 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm8614-201ENSMUST00000182528 978 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm29610-201ENSMUST00000187749 453 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm10292-202ENSMUST00000193165 585 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm38163-201ENSMUST00000194112 482 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm42502-201ENSMUST00000198550 1089 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm32536-201ENSMUST00000205209 445 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm32846-201ENSMUST00000205665 842 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Snhg1-207ENSMUST00000205909 709 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm3816-201ENSMUST00000209803 433 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm46996-201ENSMUST00000220924 408 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 4930480M12Rik-201ENSMUST00000221084 550 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm5457-201ENSMUST00000022260 333 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 AC151902.1-201ENSMUST00000227800 375 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm5045-201ENSMUST00000027054 810 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm25007-201ENSMUST00000083808 133 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Defa-ps18-201ENSMUST00000098889 371 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 4933439N06Rik-201ENSMUST00000203062 1365 ntBASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
Trim3Q9R1R2 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Olfr799-203ENSMUST00000214182 1694 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Clvs1-201ENSMUST00000038841 3604 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm14082-201ENSMUST00000118582 801 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm11409-201ENSMUST00000118621 403 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm22514-201ENSMUST00000122547 308 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm22343-201ENSMUST00000122648 286 ntBASIC4.48□□□□□ -1.69
Trim3Q9R1R2 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms