Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Mir202-201ENSMUST00000083568 72 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 0610010F05Rik-202ENSMUST00000093267 3646 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Olfr270-204ENSMUST00000215127 3145 ntAPPRIS ALT1 TSL 5 BASIC4.46□□□□□ -1.7
Lima1Q9ERG0 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.46□□□□□ -1.7
Lima1Q9ERG0 2210408I21Rik-201ENSMUST00000168779 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Gm45211-201ENSMUST00000206208 2650 ntBASIC4.46□□□□□ -1.7
Lima1Q9ERG0 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Gm43010-201ENSMUST00000195993 2878 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Csn3-203ENSMUST00000113271 1596 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Gm25096-201ENSMUST00000104043 129 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Gm11984-201ENSMUST00000118142 766 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Gm25806-201ENSMUST00000122782 122 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Gm25037-201ENSMUST00000175418 110 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Gm26828-201ENSMUST00000180640 172 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 4930509E16Rik-201ENSMUST00000181405 1191 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Mir3473g-201ENSMUST00000183494 136 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Gm28263-201ENSMUST00000185884 400 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Igkv2-107-201ENSMUST00000196000 313 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Trav3-2-201ENSMUST00000198999 305 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Gm44389-201ENSMUST00000203795 182 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Olfr1291-ps1-202ENSMUST00000219064 897 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Olfr594-201ENSMUST00000098205 1087 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Olfr1297-201ENSMUST00000099612 939 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Cacnb4-202ENSMUST00000102760 7872 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Gm42645-201ENSMUST00000201573 1627 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Gm281-201ENSMUST00000144914 2952 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Gm37789-201ENSMUST00000192862 2889 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Gm7709-201ENSMUST00000199391 1858 ntBASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
Lima1Q9ERG0 Tfpi-205ENSMUST00000111717 2962 ntTSL 5 BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Vmn1r32-201ENSMUST00000079584 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Vmn2r4-201ENSMUST00000170280 2484 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Gm1968-201ENSMUST00000100016 348 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Ceacam13-202ENSMUST00000108488 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Gm15297-201ENSMUST00000117795 290 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Gm12571-201ENSMUST00000118132 243 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Gm13213-201ENSMUST00000119668 474 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Gm15171-201ENSMUST00000122191 334 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Gm26098-201ENSMUST00000157247 288 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Gm15838-201ENSMUST00000161575 180 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Gm37095-201ENSMUST00000195421 205 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Gm44376-201ENSMUST00000197570 128 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Gm8069-201ENSMUST00000197887 154 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Gm42824-201ENSMUST00000199361 247 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Gm29793-201ENSMUST00000202874 460 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Gm44184-201ENSMUST00000204290 132 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 AC153370.1-201ENSMUST00000220296 635 ntTSL 5 BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Mir17-201ENSMUST00000083574 84 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Steap2-204ENSMUST00000115426 10408 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Lima1Q9ERG0 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 AC168056.3-201ENSMUST00000225395 2540 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Vmn1r66-201ENSMUST00000060374 1524 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Defb30-201ENSMUST00000100490 307 ntAPPRIS P2 TSL 1 (best) BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Mir105-201ENSMUST00000104655 80 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm14304-201ENSMUST00000117272 446 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Cyp2j14-ps-201ENSMUST00000117776 361 ntBASIC4.43□□□□□ -1.7
Lima1Q9ERG0 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 63.8 ms