Protein–RNA interactions for Protein: Q9D1C8

Vps28, Vacuolar protein sorting-associated protein 28 homolog, mousemouse

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps28Q9D1C8 Gm44288-201ENSMUST00000205061 2795 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm17308-201ENSMUST00000181749 1997 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm14711-201ENSMUST00000117056 217 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm14163-201ENSMUST00000117342 217 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm15001-201ENSMUST00000117657 795 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm12641-201ENSMUST00000117874 985 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm13172-201ENSMUST00000118685 256 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm13677-201ENSMUST00000120739 595 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm24773-201ENSMUST00000158513 99 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Kcne1-202ENSMUST00000166707 601 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm2056-201ENSMUST00000178852 435 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm27528-201ENSMUST00000183544 205 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm27864-201ENSMUST00000183704 190 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm27818-201ENSMUST00000184536 159 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm11983-202ENSMUST00000184940 318 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm29387-201ENSMUST00000189074 623 ntTSL 3 BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm28957-201ENSMUST00000190174 373 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm5842-201ENSMUST00000195073 622 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 AL645522.1-201ENSMUST00000197692 104 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 AL772397.1-201ENSMUST00000216707 606 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm18242-201ENSMUST00000218455 542 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm5655-201ENSMUST00000221078 901 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm23796-201ENSMUST00000084011 160 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Vmn1r71-202ENSMUST00000226874 5194 ntAPPRIS P2 BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm44678-201ENSMUST00000207828 2775 ntBASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 F13a1-201ENSMUST00000037491 3952 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
Vps28Q9D1C8 Rif1-201ENSMUST00000112693 8509 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Olfr893-202ENSMUST00000211975 2924 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Zfyve9-203ENSMUST00000106658 5987 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Ankar-202ENSMUST00000211837 4543 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm25419-201ENSMUST00000104215 191 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm15670-201ENSMUST00000117740 447 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm16383-201ENSMUST00000118122 232 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm2288-201ENSMUST00000118560 638 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm12820-201ENSMUST00000119233 342 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm15390-201ENSMUST00000120323 738 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Olfr1191-ps1-201ENSMUST00000120598 4677 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Vmn1r-ps107-201ENSMUST00000121458 581 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm14383-201ENSMUST00000121637 386 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm13366-201ENSMUST00000122198 970 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm21704-201ENSMUST00000169382 1573 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm17086-201ENSMUST00000171346 484 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Rbmy-202ENSMUST00000171534 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm26731-201ENSMUST00000180683 543 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Mir6238-201ENSMUST00000184140 129 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm28976-201ENSMUST00000188070 144 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm21708-202ENSMUST00000188091 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm10256-203ENSMUST00000189964 1573 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm8939-201ENSMUST00000192577 964 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Ighv10-4-201ENSMUST00000193702 299 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm38374-201ENSMUST00000194417 2033 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm5715-201ENSMUST00000196854 1465 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm19617-201ENSMUST00000202977 308 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm44261-201ENSMUST00000203337 209 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm44736-201ENSMUST00000205943 667 ntTSL 3 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Pramel5-201ENSMUST00000035757 2147 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Olfr134-201ENSMUST00000074883 939 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Olfr1446-201ENSMUST00000081236 1044 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm26437-201ENSMUST00000082595 105 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Mir342-201ENSMUST00000083502 99 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Xkr9-201ENSMUST00000088542 1926 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Klhl28-203ENSMUST00000222508 6459 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Usp46-201ENSMUST00000068058 4557 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.1□□□□□ -1.59
Vps28Q9D1C8 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Fam122b-202ENSMUST00000114838 3536 ntAPPRIS ALT2 TSL 1 (best) BASIC5.1□□□□□ -1.59
Vps28Q9D1C8 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.09□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms