Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm12111-201ENSMUST00000150073 349 ntTSL 3 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm17421-201ENSMUST00000167845 674 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm21894-201ENSMUST00000179631 546 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm4665-201ENSMUST00000183244 561 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm8669-201ENSMUST00000183839 945 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm28596-201ENSMUST00000185870 696 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm20896-202ENSMUST00000188585 921 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm28643-201ENSMUST00000188811 356 ntTSL 5 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm28384-201ENSMUST00000189079 463 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm8241-201ENSMUST00000189286 816 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm38131-201ENSMUST00000192449 430 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm32295-201ENSMUST00000192558 696 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm31260-201ENSMUST00000193478 696 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm37184-201ENSMUST00000194720 650 ntTSL 3 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm29920-201ENSMUST00000206876 754 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm3257-201ENSMUST00000207217 675 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm34066-201ENSMUST00000210156 825 ntTSL 5 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm45912-201ENSMUST00000210646 543 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm45249-201ENSMUST00000211021 348 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 AC140409.4-201ENSMUST00000215757 538 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 AC132474.2-201ENSMUST00000217414 573 ntTSL 5 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 AC131085.1-201ENSMUST00000224746 656 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 AC122858.1-201ENSMUST00000226212 433 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Vmn1r20-201ENSMUST00000226808 912 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 AC102291.1-201ENSMUST00000227164 529 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 AC123665.4-201ENSMUST00000228790 249 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Olfr137-201ENSMUST00000057394 942 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Olfr738-201ENSMUST00000058972 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Olfr799-201ENSMUST00000071126 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm24707-201ENSMUST00000082812 107 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Mir16-2-201ENSMUST00000083672 95 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Ryr3-211ENSMUST00000208290 15468 ntAPPRIS P3 TSL 5 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm42860-201ENSMUST00000196492 3991 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm44801-201ENSMUST00000207644 2060 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Nlrp4c-202ENSMUST00000121583 3373 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Galnt1-208ENSMUST00000178605 3796 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm4541-201ENSMUST00000208901 1848 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm28969-205ENSMUST00000186757 1581 ntTSL 5 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm28990-204ENSMUST00000189255 1581 ntTSL 5 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm28677-209ENSMUST00000190010 1581 ntTSL 5 BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm37509-201ENSMUST00000194867 3169 ntBASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Ddx56Q9D0R4 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Vmn2r76-201ENSMUST00000165771 2562 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Pramel3-202ENSMUST00000118821 3698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm6215-201ENSMUST00000119297 1386 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Tom1l1-204ENSMUST00000107869 1826 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm5796-201ENSMUST00000096184 1817 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Ireb2-201ENSMUST00000034843 5770 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm10378-201ENSMUST00000100696 429 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Trav10n-201ENSMUST00000103612 343 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm12281-201ENSMUST00000119536 298 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm23211-201ENSMUST00000122717 308 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm13528-201ENSMUST00000139288 410 ntTSL 2 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm15868-201ENSMUST00000144291 520 ntTSL 5 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm23773-201ENSMUST00000158985 296 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm7152-201ENSMUST00000163570 605 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Naa60-210ENSMUST00000176224 501 ntTSL 5 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Obox3-ps2-201ENSMUST00000177243 1004 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm26554-201ENSMUST00000180801 845 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm27342-201ENSMUST00000183530 109 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm28188-201ENSMUST00000190483 236 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm20915-201ENSMUST00000191575 663 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm18410-201ENSMUST00000207199 577 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 AC091522.1-201ENSMUST00000213934 850 ntTSL 5 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm6477-201ENSMUST00000217098 764 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 AC127242.4-201ENSMUST00000221242 470 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm3565-201ENSMUST00000222670 609 ntBASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Lcn12-201ENSMUST00000028312 716 ntAPPRIS P2 TSL 1 (best) BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Olfr1008-201ENSMUST00000054868 942 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Ddx56Q9D0R4 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 83.2 ms