Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.36□□□□□ -1.55
Smc1aQ9CU62 Gm8674-201ENSMUST00000179367 3047 ntBASIC5.36□□□□□ -1.55
Smc1aQ9CU62 Olfr2-203ENSMUST00000208147 6178 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Smc1aQ9CU62 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Smc1aQ9CU62 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm45378-201ENSMUST00000211063 2711 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm5746-201ENSMUST00000183550 2200 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 AC123705.2-201ENSMUST00000221653 2009 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Scgb2b3-201ENSMUST00000108090 339 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm11633-201ENSMUST00000118176 444 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm11196-201ENSMUST00000119052 395 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm11822-201ENSMUST00000119177 415 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm12007-201ENSMUST00000120978 597 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm23837-201ENSMUST00000122656 286 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 4933416E03Rik-201ENSMUST00000133091 1126 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 2210408F21Rik-206ENSMUST00000138653 417 ntTSL 5 BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm6542-201ENSMUST00000153606 772 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm6632-201ENSMUST00000168425 954 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 1700031A10Rik-201ENSMUST00000174380 656 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm20711-201ENSMUST00000177351 714 ntTSL 3 BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm20954-201ENSMUST00000189078 644 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 1700031M16Rik-204ENSMUST00000189724 824 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 1700031M16Rik-207ENSMUST00000191513 847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm37209-201ENSMUST00000194109 1276 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm37815-201ENSMUST00000195665 411 ntTSL 5 BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm32554-201ENSMUST00000196310 970 ntTSL 5 BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Rps27-206ENSMUST00000197361 329 ntTSL 3 BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm6719-201ENSMUST00000202067 335 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm44603-201ENSMUST00000206820 367 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm45261-201ENSMUST00000211023 594 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 AC142273.1-201ENSMUST00000213723 673 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 AC164087.1-201ENSMUST00000215174 733 ntTSL 3 BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 CR974592.1-201ENSMUST00000220422 574 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 AC158142.3-201ENSMUST00000226230 675 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 AC121912.1-201ENSMUST00000227525 1201 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Ocm-201ENSMUST00000031622 658 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Mid2-203ENSMUST00000112993 5916 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Trpc5os-202ENSMUST00000178233 3515 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Dnah3-201ENSMUST00000046993 12252 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Zfp322a-201ENSMUST00000050101 4844 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 AC160931.3-201ENSMUST00000222111 2267 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Gm43065-201ENSMUST00000198971 2092 ntBASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Smc1aQ9CU62 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 5330437M03Rik-201ENSMUST00000201318 4083 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Hmcn1-201ENSMUST00000074783 17908 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm12039-201ENSMUST00000118219 180 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm14861-201ENSMUST00000119451 455 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm11790-201ENSMUST00000119569 455 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm12237-201ENSMUST00000120158 470 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 0610040B10Rik-201ENSMUST00000160231 501 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm8374-201ENSMUST00000163826 672 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm23925-202ENSMUST00000188429 132 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm28957-201ENSMUST00000190174 373 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 4930540E01Rik-201ENSMUST00000192569 1146 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Ighv3-4-201ENSMUST00000193408 353 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm37571-201ENSMUST00000195048 614 ntTSL 3 BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm42567-201ENSMUST00000199268 352 ntTSL 3 BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm19617-201ENSMUST00000202977 308 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm44733-202ENSMUST00000209063 582 ntTSL 5 BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm45610-201ENSMUST00000209227 784 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm45710-201ENSMUST00000212847 215 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm7045-201ENSMUST00000221466 605 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 AC166358.4-201ENSMUST00000223030 105 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm7040-201ENSMUST00000223271 443 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 AC139758.1-201ENSMUST00000226573 930 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 AC154270.1-201ENSMUST00000227226 426 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 AC127371.1-201ENSMUST00000228516 312 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Rpl21-ps14-201ENSMUST00000080279 483 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm26330-201ENSMUST00000082817 104 ntBASIC5.34□□□□□ -1.55
Smc1aQ9CU62 F630028O10Rik-201ENSMUST00000133125 2771 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Smc1aQ9CU62 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.34□□□□□ -1.56
Smc1aQ9CU62 Gm42583-201ENSMUST00000202678 6700 ntBASIC5.34□□□□□ -1.56
Smc1aQ9CU62 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.56
Smc1aQ9CU62 Olfr270-201ENSMUST00000095084 2204 ntAPPRIS ALT1 TSL 5 BASIC5.33□□□□□ -1.56
Smc1aQ9CU62 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms