Protein–RNA interactions for Protein: Q9CQ56

Use1, Vesicle transport protein USE1, mousemouse

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Use1Q9CQ56 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Use1Q9CQ56 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Use1Q9CQ56 Gm2522-201ENSMUST00000204280 322 ntBASIC4.4□□□□□ -1.71
Use1Q9CQ56 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC4.4□□□□□ -1.71
Use1Q9CQ56 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC4.4□□□□□ -1.71
Use1Q9CQ56 AC171204.1-201ENSMUST00000215867 975 ntTSL 5 BASIC4.4□□□□□ -1.71
Use1Q9CQ56 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
Use1Q9CQ56 Vmn1r237-201ENSMUST00000077301 950 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Use1Q9CQ56 1700057G04Rik-201ENSMUST00000098477 1052 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Use1Q9CQ56 Defb25-201ENSMUST00000099203 293 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
Use1Q9CQ56 Olfr1037-201ENSMUST00000099911 1125 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
Use1Q9CQ56 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC4.4□□□□□ -1.71
Use1Q9CQ56 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.4□□□□□ -1.71
Use1Q9CQ56 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
Use1Q9CQ56 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
Use1Q9CQ56 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC4.4□□□□□ -1.71
Use1Q9CQ56 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Gm13084-201ENSMUST00000075045 1805 ntAPPRIS P3 TSL 1 (best) BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Gm37718-201ENSMUST00000191655 2631 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Spaca1-203ENSMUST00000108148 833 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 Gm14861-201ENSMUST00000119451 455 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC4.39□□□□□ -1.71
Use1Q9CQ56 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Gm23960-201ENSMUST00000157206 131 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 Mog-202ENSMUST00000167275 627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Gm2959-201ENSMUST00000169844 621 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 Mir6343-201ENSMUST00000183584 84 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 Gm8669-201ENSMUST00000183839 945 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 Gm28998-201ENSMUST00000186194 919 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Gm3145-201ENSMUST00000188584 220 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 Gm28576-201ENSMUST00000189007 919 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Gm43304-201ENSMUST00000196803 326 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Gm44402-201ENSMUST00000203677 238 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC4.39□□□□□ -1.71
Use1Q9CQ56 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Olfr974-201ENSMUST00000062833 1080 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Gm25140-201ENSMUST00000083254 140 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Use1Q9CQ56 AC160130.1-201ENSMUST00000220734 2735 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Use1Q9CQ56 C730045M19Rik-201ENSMUST00000201944 1315 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 Gm38307-201ENSMUST00000195630 1840 ntBASIC4.39□□□□□ -1.71
Use1Q9CQ56 Postn-204ENSMUST00000117373 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
Use1Q9CQ56 4930435E12Rik-201ENSMUST00000122078 1368 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Vmn2r83-201ENSMUST00000167976 2610 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC4.39□□□□□ -1.71
Use1Q9CQ56 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Olfr987-202ENSMUST00000111598 1418 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm12289-201ENSMUST00000130860 2235 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Plch1-209ENSMUST00000161052 1472 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Cdr1-201ENSMUST00000166381 2313 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm43605-201ENSMUST00000199663 3426 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Olfr1457-203ENSMUST00000214561 1829 ntTSL 5 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Mir147-201ENSMUST00000102354 79 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm14393-202ENSMUST00000109066 564 ntTSL 2 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 4930404H24Rik-201ENSMUST00000109783 331 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm12707-201ENSMUST00000155789 489 ntTSL 3 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm23537-201ENSMUST00000157536 330 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm25553-201ENSMUST00000158076 79 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm23046-201ENSMUST00000158369 284 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm24675-201ENSMUST00000158757 259 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm29000-207ENSMUST00000190152 1160 ntTSL 5 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm6546-201ENSMUST00000192096 766 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm43276-201ENSMUST00000199712 364 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm44879-201ENSMUST00000207007 503 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 AC155236.1-201ENSMUST00000220591 923 ntTSL 5 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 AC166358.9-201ENSMUST00000220653 375 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm4057-201ENSMUST00000221407 368 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 AC154851.2-201ENSMUST00000222172 644 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 CT025525.4-201ENSMUST00000227728 277 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Snora52-201ENSMUST00000082732 137 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm24525-201ENSMUST00000082917 151 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm23796-201ENSMUST00000084011 160 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 Olfr390-201ENSMUST00000092919 936 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Mir504-201ENSMUST00000093602 79 ntBASIC4.38□□□□□ -1.71
Use1Q9CQ56 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.38□□□□□ -1.71
Use1Q9CQ56 Gm5590-202ENSMUST00000186976 2315 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms