Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm45157-201ENSMUST00000208729 401 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm45379-201ENSMUST00000211772 549 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm30606-201ENSMUST00000212801 847 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 AC154636.3-201ENSMUST00000221489 1214 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 AC164597.2-201ENSMUST00000226738 603 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Olfr1086-201ENSMUST00000099878 933 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Vmn1r213-203ENSMUST00000228031 3367 ntAPPRIS ALT2 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Olfr1471-205ENSMUST00000217482 1545 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Olfr123-203ENSMUST00000216051 2716 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Ceacam3-201ENSMUST00000108491 3261 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Olfr1328-202ENSMUST00000215312 5038 ntAPPRIS ALT1 TSL 5 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 1700080O16Rik-201ENSMUST00000033449 1454 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC6.08□□□□□ -1.44
Brf1Q8CFK2 Epha7-201ENSMUST00000029964 6746 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Nsa2-201ENSMUST00000073456 2700 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Zfp873-201ENSMUST00000105313 1893 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Macc1-202ENSMUST00000221866 6937 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Kif2a-201ENSMUST00000022204 5304 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Gm42492-201ENSMUST00000195780 2915 ntBASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Creb5-203ENSMUST00000203528 7917 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Ighv9-4-201ENSMUST00000103482 294 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Lrrc51-207ENSMUST00000106967 675 ntTSL 3 BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Gm14995-201ENSMUST00000117135 391 ntBASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Gm14175-201ENSMUST00000119835 241 ntBASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Gm25981-201ENSMUST00000157921 295 ntBASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Gm23965-201ENSMUST00000157969 142 ntBASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Gm7335-201ENSMUST00000172475 373 ntBASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Mir7012-201ENSMUST00000183900 64 ntBASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Igkv3-8-201ENSMUST00000197635 339 ntBASIC6.07□□□□□ -1.44
Brf1Q8CFK2 AC138284.5-201ENSMUST00000214389 652 ntBASIC6.07□□□□□ -1.44
Brf1Q8CFK2 AC122395.1-201ENSMUST00000214666 374 ntTSL 5 BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 AC122188.1-201ENSMUST00000217534 312 ntBASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Gm4263-201ENSMUST00000220693 1101 ntBASIC6.07□□□□□ -1.44
Brf1Q8CFK2 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 AC138765.1-201ENSMUST00000228657 385 ntBASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Fbxw18-201ENSMUST00000098359 1519 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Gm26523-201ENSMUST00000180713 1658 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Olfr300-ps1-201ENSMUST00000174262 2395 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Ubtfl1-203ENSMUST00000169398 4430 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Brf1Q8CFK2 Gm19176-201ENSMUST00000222149 1831 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 AC112142.1-203ENSMUST00000228670 2472 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Olfr13-202ENSMUST00000216179 3677 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Dlg1-204ENSMUST00000115196 3418 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Mir669o-201ENSMUST00000103898 96 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm11020-201ENSMUST00000109447 186 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm15185-201ENSMUST00000117397 746 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm8202-201ENSMUST00000117682 310 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm12423-201ENSMUST00000118334 135 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm14520-201ENSMUST00000119258 387 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm14046-201ENSMUST00000119389 509 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm8430-201ENSMUST00000119780 471 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm16463-201ENSMUST00000120527 721 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Olfr360-201ENSMUST00000120704 954 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm15885-201ENSMUST00000122114 388 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm15563-201ENSMUST00000124953 410 ntTSL 3 BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm15892-203ENSMUST00000156149 1001 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm24551-201ENSMUST00000158645 92 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Esp8-201ENSMUST00000171813 901 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 1700116B05Rik-201ENSMUST00000173461 414 ntTSL 2 BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm24080-201ENSMUST00000175178 232 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm26731-201ENSMUST00000180683 543 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm27543-201ENSMUST00000183562 177 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm28061-201ENSMUST00000189085 807 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm2497-201ENSMUST00000189539 601 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm37337-201ENSMUST00000192601 993 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm44463-201ENSMUST00000198895 137 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Igkv12-66-201ENSMUST00000199305 348 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm43493-201ENSMUST00000199837 202 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm43979-201ENSMUST00000203179 475 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm8999-201ENSMUST00000204951 969 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 4930543K20Rik-201ENSMUST00000217044 355 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 AC163621.2-201ENSMUST00000222229 682 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm41002-201ENSMUST00000222479 312 ntTSL 3 BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm9512-201ENSMUST00000223112 497 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 AC125484.1-201ENSMUST00000223218 234 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 4930455B14Rik-204ENSMUST00000224776 848 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 CT009600.2-201ENSMUST00000226638 481 ntBASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Cxcl15-201ENSMUST00000031322 2127 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Gm10112-201ENSMUST00000075226 354 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Brf1Q8CFK2 Rps27a-ps2-201ENSMUST00000078766 467 ntBASIC6.06□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 95.8 ms