Protein–RNA interactions for Protein: Q8BI79

Ccdc40, Coiled-coil domain-containing protein 40, mousemouse

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40Q8BI79 AC164424.1-201ENSMUST00000221690 170 ntBASIC5.04□□□□□ -1.6
Ccdc40Q8BI79 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC5.04□□□□□ -1.6
Ccdc40Q8BI79 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.04□□□□□ -1.6
Ccdc40Q8BI79 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc40Q8BI79 Creg1-201ENSMUST00000040298 425 ntTSL 3 BASIC5.04□□□□□ -1.6
Ccdc40Q8BI79 Mrgprb8-201ENSMUST00000056676 1123 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc40Q8BI79 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc40Q8BI79 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc40Q8BI79 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc40Q8BI79 V1ra8-201ENSMUST00000078371 890 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Ccdc40Q8BI79 Gm25005-201ENSMUST00000083812 156 ntBASIC5.04□□□□□ -1.6
Ccdc40Q8BI79 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.04□□□□□ -1.6
Ccdc40Q8BI79 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.04□□□□□ -1.6
Ccdc40Q8BI79 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc40Q8BI79 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
Ccdc40Q8BI79 AC155921.1-201ENSMUST00000216568 3841 ntBASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 AC124556.1-201ENSMUST00000218256 1319 ntBASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Olfr1299-201ENSMUST00000207228 1678 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Gm14575-201ENSMUST00000117210 560 ntBASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Gm12423-201ENSMUST00000118334 135 ntBASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Gm11483-201ENSMUST00000119839 247 ntBASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Gm13677-201ENSMUST00000120739 595 ntBASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Gm25332-201ENSMUST00000158038 105 ntBASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Gng2-206ENSMUST00000162425 393 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Mir6343-201ENSMUST00000183584 84 ntBASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 4930535G08Rik-201ENSMUST00000192017 425 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Gm36954-201ENSMUST00000195362 363 ntBASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Gm2691-201ENSMUST00000203205 901 ntBASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Minpp1-ps-201ENSMUST00000203344 946 ntBASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Gm19256-201ENSMUST00000218550 231 ntBASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Olfr1116-201ENSMUST00000090717 924 ntAPPRIS P2 BASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Gm5458-201ENSMUST00000096121 997 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Olfr1104-201ENSMUST00000099869 933 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Cbll1-205ENSMUST00000188326 1399 ntTSL 2 BASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 BC051142-201ENSMUST00000078615 1899 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
Ccdc40Q8BI79 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 AC153959.1-201ENSMUST00000213617 1694 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Dst-202ENSMUST00000097786 17212 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Wdr17-209ENSMUST00000150488 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm38240-201ENSMUST00000195110 2487 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm12760-201ENSMUST00000117861 482 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm11448-201ENSMUST00000120427 450 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Olfr990-ps1-201ENSMUST00000120485 904 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm12752-201ENSMUST00000121657 811 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 A230083N12Rik-201ENSMUST00000126646 572 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm13584-201ENSMUST00000137134 603 ntTSL 3 BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm25714-201ENSMUST00000158626 296 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm16549-201ENSMUST00000160445 503 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 5430401F13Rik-202ENSMUST00000161385 608 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm17081-201ENSMUST00000167363 478 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm20647-201ENSMUST00000176396 857 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Mir7653-201ENSMUST00000184358 61 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm36985-201ENSMUST00000195595 379 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 C78283-201ENSMUST00000202711 848 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 4930513D17Rik-203ENSMUST00000202800 1159 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm45474-201ENSMUST00000209471 408 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm6145-201ENSMUST00000209522 710 ntTSL 3 BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm33601-201ENSMUST00000210001 961 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm8556-201ENSMUST00000210437 664 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm46138-201ENSMUST00000215294 426 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Vmn2r-ps92-201ENSMUST00000220242 388 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 AC166358.9-201ENSMUST00000220653 375 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm7040-201ENSMUST00000223271 443 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 AC129308.2-201ENSMUST00000224588 789 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Pmis2-201ENSMUST00000051495 699 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm16415-201ENSMUST00000080097 489 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm10916-201ENSMUST00000080330 483 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Pdc-202ENSMUST00000185698 3335 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm18491-201ENSMUST00000192492 1594 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm37115-201ENSMUST00000193750 2849 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Olfr414-202ENSMUST00000192358 4526 ntAPPRIS P1 TSL 2 BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Stk-ps2-201ENSMUST00000051224 4667 ntTSL 2 BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm8744-201ENSMUST00000204475 3581 ntBASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
Ccdc40Q8BI79 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc40Q8BI79 Gm28242-201ENSMUST00000187274 1492 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Ccdc40Q8BI79 Zfp329-202ENSMUST00000108546 2577 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms