Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm24300-201ENSMUST00000177809 109 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm24017-201ENSMUST00000178726 109 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm23952-201ENSMUST00000179380 109 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 1810026B05Rik-201ENSMUST00000183916 432 ntTSL 3 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm28943-201ENSMUST00000186187 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm28736-201ENSMUST00000186257 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm29401-201ENSMUST00000186690 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm29178-204ENSMUST00000186784 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm28589-201ENSMUST00000186991 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm28936-201ENSMUST00000187153 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm29121-201ENSMUST00000187611 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm28243-201ENSMUST00000187801 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm28844-202ENSMUST00000187977 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm29058-201ENSMUST00000189510 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm29624-201ENSMUST00000190018 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm28780-201ENSMUST00000190223 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm28969-211ENSMUST00000190992 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm28990-207ENSMUST00000191219 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm36468-201ENSMUST00000192119 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm31572-201ENSMUST00000193341 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm30175-201ENSMUST00000194173 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm30858-201ENSMUST00000195516 615 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 AC133189.1-201ENSMUST00000198820 140 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm17811-201ENSMUST00000206193 387 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm18468-201ENSMUST00000207321 369 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm18470-201ENSMUST00000207467 420 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm18465-201ENSMUST00000207468 369 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm18464-201ENSMUST00000207803 420 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm18458-201ENSMUST00000207908 369 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Olfr1452-ps1-201ENSMUST00000208396 925 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm18461-201ENSMUST00000208421 420 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 AC155805.1-201ENSMUST00000222419 3808 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 AC154576.2-203ENSMUST00000224736 253 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 CT030254.3-201ENSMUST00000225959 1231 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Vmn1r39-202ENSMUST00000226783 918 ntAPPRIS P2 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm25739-201ENSMUST00000082886 107 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Mir331-201ENSMUST00000083673 96 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Fam24a-201ENSMUST00000084505 371 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Olfr810-201ENSMUST00000091986 1006 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Mir504-201ENSMUST00000093602 79 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Olfr887-202ENSMUST00000212502 6281 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 4933436I01Rik-201ENSMUST00000026325 1426 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Gm28832-201ENSMUST00000188603 1498 ntTSL 5 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 AC131068.3-201ENSMUST00000228438 1456 ntBASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Platr25-204ENSMUST00000221996 2458 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
Trim40Q3UWA4 Oog2-201ENSMUST00000080405 1917 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim40Q3UWA4 AC159308.1-201ENSMUST00000216615 1351 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Fgd4-206ENSMUST00000161861 8342 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm17791-201ENSMUST00000185660 1501 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Olfr826-202ENSMUST00000203720 1535 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm8995-201ENSMUST00000184842 7280 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Cep290-206ENSMUST00000219765 7985 ntTSL 5 BASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm25419-201ENSMUST00000104215 191 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm14621-201ENSMUST00000117709 689 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm11483-201ENSMUST00000119839 247 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm11448-201ENSMUST00000120427 450 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm2012-201ENSMUST00000121900 1131 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm11197-201ENSMUST00000145158 839 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm23171-201ENSMUST00000157159 264 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm24854-201ENSMUST00000158025 98 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm25363-201ENSMUST00000158850 245 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm16557-201ENSMUST00000159182 191 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm16114-201ENSMUST00000161930 300 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm8356-202ENSMUST00000164917 984 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm7316-201ENSMUST00000165395 445 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm22859-201ENSMUST00000174978 122 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm20657-201ENSMUST00000177079 515 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Prl3c1-201ENSMUST00000018066 823 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
Trim40Q3UWA4 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm28118-201ENSMUST00000185957 294 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm28429-201ENSMUST00000188521 363 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm29097-201ENSMUST00000190273 422 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Rps27a-ps1-201ENSMUST00000191424 463 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm37421-201ENSMUST00000193088 132 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm37187-201ENSMUST00000193425 341 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Ighv10-4-201ENSMUST00000193702 299 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm43554-201ENSMUST00000199987 186 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Snhg1-211ENSMUST00000206155 605 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Trim40Q3UWA4 Gm8679-201ENSMUST00000210651 1036 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 AC151971.3-201ENSMUST00000214694 404 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.42□□□□□ -1.7
Trim40Q3UWA4 AC116724.1-201ENSMUST00000227900 972 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 84.4 ms