Protein–RNA interactions for Protein: Q3UDK1

Trafd1, TRAF-type zinc finger domain-containing protein 1, mousemouse

Predictions only

Length 580 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trafd1Q3UDK1 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm14124-201ENSMUST00000109922 3018 ntAPPRIS P1 TSL 3 BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Gm19744-204ENSMUST00000188936 4533 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
Trafd1Q3UDK1 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm43185-201ENSMUST00000197507 2775 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Kcnt2-203ENSMUST00000120796 3540 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Cldn34b4-201ENSMUST00000101419 1103 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Trbv26-201ENSMUST00000103280 344 ntAPPRIS ALT2 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm23709-201ENSMUST00000104364 130 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm10964-201ENSMUST00000106852 120 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Prl2c1-202ENSMUST00000110335 852 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Mup-ps18-201ENSMUST00000120145 531 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm5391-201ENSMUST00000121155 613 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm13440-201ENSMUST00000121665 496 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Ccdc34os-201ENSMUST00000123633 979 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 4930440I19Rik-202ENSMUST00000145972 676 ntTSL 2 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm23046-201ENSMUST00000158369 284 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm16589-201ENSMUST00000159522 918 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm16114-201ENSMUST00000161930 300 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm22254-201ENSMUST00000179186 110 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm26828-201ENSMUST00000180640 172 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Mir7222-201ENSMUST00000183740 75 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm18493-201ENSMUST00000192084 1612 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm45228-201ENSMUST00000206585 352 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm44993-201ENSMUST00000208435 842 ntTSL 3 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm45305-201ENSMUST00000209799 815 ntTSL 5 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Olfr578-202ENSMUST00000215606 3665 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Olfr655-204ENSMUST00000216750 2010 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 AC147615.1-201ENSMUST00000218914 441 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 AC163354.1-207ENSMUST00000221270 1243 ntTSL 5 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 AC134860.3-201ENSMUST00000223564 1300 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 AC131117.2-203ENSMUST00000225886 950 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Fbxw26-201ENSMUST00000071917 1824 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Gm10145-201ENSMUST00000077776 462 ntBASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.59□□□□□ -1.67
Trafd1Q3UDK1 Olfr889-202ENSMUST00000217286 5673 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Trafd1Q3UDK1 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.59□□□□□ -1.68
Trafd1Q3UDK1 Gm15304-201ENSMUST00000122150 2640 ntBASIC4.59□□□□□ -1.68
Trafd1Q3UDK1 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.68
Trafd1Q3UDK1 Zfp426-201ENSMUST00000080386 2417 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Gm37053-201ENSMUST00000192399 2087 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Ank2-208ENSMUST00000182078 14305 ntAPPRIS P2 TSL 5 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Kpna2-202ENSMUST00000106768 541 ntTSL 2 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Rps19-ps7-201ENSMUST00000116122 438 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Gm12978-201ENSMUST00000121250 522 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Gm15530-201ENSMUST00000122206 555 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Gm22968-201ENSMUST00000157955 118 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Vmn1r170-201ENSMUST00000170166 915 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Mir6410-201ENSMUST00000184204 104 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Gm27457-201ENSMUST00000184771 156 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Gm18100-201ENSMUST00000200897 452 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Gm20997-201ENSMUST00000205148 231 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Gm45072-201ENSMUST00000208673 929 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Gm20586-201ENSMUST00000210122 547 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 AC166902.1-201ENSMUST00000216653 517 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Olfr603-202ENSMUST00000218246 1021 ntAPPRIS P1 TSL 5 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 AC109180.1-201ENSMUST00000218676 398 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Gm3086-202ENSMUST00000221248 310 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 AC158388.1-201ENSMUST00000225441 256 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 AC151902.1-201ENSMUST00000227800 375 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Mir365-2-201ENSMUST00000083555 112 ntBASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Vmn1r43-201ENSMUST00000089418 1069 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Fpr-rs7-201ENSMUST00000095637 1017 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Trafd1Q3UDK1 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 77.8 ms