Protein–RNA interactions for Protein: Q3UAW9

Brf2, Transcription factor IIIB 50 kDa subunit, mousemouse

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf2Q3UAW9 Gm22261-201ENSMUST00000158691 324 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Gm17043-201ENSMUST00000164621 1283 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Esp23-201ENSMUST00000178532 646 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Gm26907-201ENSMUST00000181794 729 ntTSL 5 BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Mir6400-201ENSMUST00000184870 92 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 D530049I02Rik-201ENSMUST00000186582 562 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Gm29159-201ENSMUST00000187969 379 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Gm33571-201ENSMUST00000193271 657 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Gm9931-201ENSMUST00000193584 1185 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Gm3933-201ENSMUST00000195391 439 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Gm8929-201ENSMUST00000197781 1132 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 1700126G02Rik-201ENSMUST00000204351 725 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Gm18598-201ENSMUST00000207724 597 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Olfr654-202ENSMUST00000210457 1156 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Gm36247-201ENSMUST00000211834 285 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 AC137127.3-201ENSMUST00000213340 349 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Gm3800-201ENSMUST00000221086 554 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 AC147256.1-201ENSMUST00000221589 626 ntTSL 3 BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 AL671874.1-201ENSMUST00000223746 1123 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 AC131068.1-201ENSMUST00000226891 482 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 AC154467.1-201ENSMUST00000227527 449 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Fcer1a-201ENSMUST00000049706 998 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Olfr629-201ENSMUST00000051346 1122 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Dnah12-202ENSMUST00000073309 611 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Olfr654-201ENSMUST00000098173 1155 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Bsph1-201ENSMUST00000098811 822 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Ago2-201ENSMUST00000044113 13705 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Olfr1195-202ENSMUST00000213545 2585 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 2610044O15Rik8-205ENSMUST00000190157 1776 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Gm44027-201ENSMUST00000203419 3480 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 AC123705.2-201ENSMUST00000221653 2009 ntBASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Olfr1307-201ENSMUST00000099604 15582 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Angpt1-201ENSMUST00000022921 4260 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Brf2Q3UAW9 Gm37244-201ENSMUST00000191748 1981 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Olfr1449-203ENSMUST00000214079 1304 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm43065-201ENSMUST00000198971 2092 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Vmn1r63-201ENSMUST00000075085 2172 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Trbv13-3-201ENSMUST00000103271 340 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm9733-201ENSMUST00000108361 618 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm22468-201ENSMUST00000116680 120 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm26248-201ENSMUST00000116700 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm26137-201ENSMUST00000116701 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm26190-201ENSMUST00000116704 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm24617-201ENSMUST00000116705 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm25778-201ENSMUST00000116713 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm25774-201ENSMUST00000116717 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm22102-201ENSMUST00000116730 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm23177-201ENSMUST00000116784 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm24193-201ENSMUST00000116801 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm24744-201ENSMUST00000116833 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm24427-201ENSMUST00000116896 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm22346-201ENSMUST00000116918 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm23606-201ENSMUST00000116938 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm22029-201ENSMUST00000116940 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm26298-201ENSMUST00000116956 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm23844-201ENSMUST00000116959 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm24484-201ENSMUST00000117009 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm25347-201ENSMUST00000117026 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm22112-201ENSMUST00000117032 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm15073-201ENSMUST00000117432 634 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm15779-201ENSMUST00000117470 412 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm13452-201ENSMUST00000120896 1097 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 1700080G11Rik-201ENSMUST00000156401 436 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm23819-201ENSMUST00000158744 109 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm22991-201ENSMUST00000178126 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm25754-201ENSMUST00000178653 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm22419-201ENSMUST00000178780 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm24802-201ENSMUST00000178897 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm25208-201ENSMUST00000178964 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm24567-201ENSMUST00000179294 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm23943-201ENSMUST00000179712 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm25228-201ENSMUST00000180121 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm23304-201ENSMUST00000180209 121 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm27528-201ENSMUST00000183544 205 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 4930598F16Rik-201ENSMUST00000187352 761 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm28872-201ENSMUST00000191518 158 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm34176-201ENSMUST00000192621 474 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm2147-201ENSMUST00000193588 639 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm38279-201ENSMUST00000194067 1131 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm42750-201ENSMUST00000199745 353 ntTSL 2 BASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm42579-201ENSMUST00000200512 734 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm18011-201ENSMUST00000203717 565 ntBASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
Brf2Q3UAW9 Gm19237-201ENSMUST00000205036 1132 ntBASIC4.74□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 71.2 ms