Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Akap5-201ENSMUST00000095610 6687 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
SgcbP82349 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC5.63□□□□□ -1.51
SgcbP82349 Lifr-204ENSMUST00000226471 3392 ntAPPRIS P3 BASIC5.63□□□□□ -1.51
SgcbP82349 Vmn2r63-201ENSMUST00000163803 2580 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SgcbP82349 Mnd1-ps-202ENSMUST00000224435 2574 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SgcbP82349 Gm10650-202ENSMUST00000196581 1969 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Vmn1r6-206ENSMUST00000227847 8073 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
SgcbP82349 Olfr1308-202ENSMUST00000207560 2093 ntAPPRIS P1 TSL 3 BASIC5.62□□□□□ -1.51
SgcbP82349 Il18r1-202ENSMUST00000108044 4158 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SgcbP82349 Gm43719-201ENSMUST00000200088 2199 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC5.62□□□□□ -1.51
SgcbP82349 Gm8822-201ENSMUST00000118948 2347 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Olfr1275-202ENSMUST00000216421 2418 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SgcbP82349 Nxt2-201ENSMUST00000042329 2447 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SgcbP82349 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC5.62□□□□□ -1.51
SgcbP82349 Gm26766-201ENSMUST00000181411 3677 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SgcbP82349 Gm25346-201ENSMUST00000104509 128 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.62□□□□□ -1.51
SgcbP82349 3100003L05Rik-201ENSMUST00000130240 664 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SgcbP82349 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC5.62□□□□□ -1.51
SgcbP82349 Rpl39-ps-201ENSMUST00000142604 355 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Gm6486-201ENSMUST00000166202 434 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Gm17538-201ENSMUST00000168236 327 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Gm24103-201ENSMUST00000174930 77 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Gm23977-201ENSMUST00000177871 74 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SgcbP82349 Gm26871-203ENSMUST00000181060 355 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SgcbP82349 Mir6367-201ENSMUST00000183385 102 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC5.62□□□□□ -1.51
SgcbP82349 Gm36984-201ENSMUST00000192770 235 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Ighv1-45-201ENSMUST00000193677 352 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Gm5694-201ENSMUST00000195648 641 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Gm42425-201ENSMUST00000197756 565 ntTSL 5 BASIC5.62□□□□□ -1.51
SgcbP82349 Gm34225-201ENSMUST00000205469 443 ntTSL 5 BASIC5.62□□□□□ -1.51
SgcbP82349 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC5.62□□□□□ -1.51
SgcbP82349 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SgcbP82349 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Gm45303-201ENSMUST00000211239 676 ntTSL 3 BASIC5.62□□□□□ -1.51
SgcbP82349 Gm45857-201ENSMUST00000212207 356 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Gm7692-201ENSMUST00000213534 409 ntBASIC5.62□□□□□ -1.51
SgcbP82349 AC153557.1-201ENSMUST00000217697 403 ntBASIC5.62□□□□□ -1.51
SgcbP82349 AC153568.1-201ENSMUST00000218165 341 ntTSL 2 BASIC5.62□□□□□ -1.51
SgcbP82349 AC122905.2-201ENSMUST00000220325 269 ntBASIC5.62□□□□□ -1.51
SgcbP82349 AC116589.7-201ENSMUST00000221061 239 ntBASIC5.62□□□□□ -1.51
SgcbP82349 AC164117.1-201ENSMUST00000221726 239 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Gm32526-201ENSMUST00000221878 981 ntBASIC5.62□□□□□ -1.51
SgcbP82349 2900092C05Rik-201ENSMUST00000032541 887 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SgcbP82349 4930515G13Rik-201ENSMUST00000057521 492 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC5.62□□□□□ -1.51
SgcbP82349 Gm29461-201ENSMUST00000189232 4176 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SgcbP82349 Sirpb1c-201ENSMUST00000050623 1499 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
SgcbP82349 Zfp27-204ENSMUST00000161904 3090 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SgcbP82349 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC5.62□□□□□ -1.51
SgcbP82349 Zfp935-204ENSMUST00000223247 1949 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
SgcbP82349 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SgcbP82349 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
SgcbP82349 BC080695-201ENSMUST00000105765 2102 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SgcbP82349 Zfp81-201ENSMUST00000054072 6639 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
SgcbP82349 Gm42992-201ENSMUST00000197043 6836 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.62□□□□□ -1.51
SgcbP82349 Gm11242-201ENSMUST00000120103 2457 ntBASIC5.62□□□□□ -1.51
SgcbP82349 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC5.61□□□□□ -1.51
SgcbP82349 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Gm43496-201ENSMUST00000201682 3001 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Tlr11-202ENSMUST00000185091 3207 ntAPPRIS P2 TSL 2 BASIC5.61□□□□□ -1.51
SgcbP82349 Olfr281-202ENSMUST00000217517 4535 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Mir678-201ENSMUST00000102114 84 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Mir450-2-201ENSMUST00000102444 69 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Mup1-203ENSMUST00000107499 797 ntAPPRIS P3 TSL 2 BASIC5.61□□□□□ -1.51
SgcbP82349 Gm22952-201ENSMUST00000116720 120 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Gm12543-201ENSMUST00000120410 543 ntBASIC5.61□□□□□ -1.51
SgcbP82349 2610024D14Rik-201ENSMUST00000121233 294 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Gm4789-201ENSMUST00000121708 1216 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Rps29-ps-201ENSMUST00000122083 172 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Gm25784-201ENSMUST00000122524 81 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC5.61□□□□□ -1.51
SgcbP82349 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Gm4487-201ENSMUST00000150617 442 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Gm22235-201ENSMUST00000157085 110 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Mir1960-201ENSMUST00000157488 78 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Gm24534-201ENSMUST00000157949 291 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Gm26530-201ENSMUST00000180969 3941 ntTSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 Mir7082-201ENSMUST00000183526 92 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Gm9569-201ENSMUST00000187492 787 ntBASIC5.61□□□□□ -1.51
SgcbP82349 1700108F19Rik-203ENSMUST00000188798 619 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Gm29194-201ENSMUST00000189250 2167 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Gm28357-201ENSMUST00000190256 622 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Gm37313-201ENSMUST00000191673 290 ntBASIC5.61□□□□□ -1.51
SgcbP82349 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC5.61□□□□□ -1.51
SgcbP82349 Gm39129-201ENSMUST00000207553 806 ntTSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 Gm21123-201ENSMUST00000210822 1734 ntTSL 1 (best) BASIC5.61□□□□□ -1.51
SgcbP82349 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC5.61□□□□□ -1.51
SgcbP82349 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC5.61□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms