Protein–RNA interactions for Protein: P63158

Hmgb1, High mobility group protein B1, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1P63158 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb1P63158 1700016G14Rik-201ENSMUST00000136906 863 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb1P63158 1700046C09Rik-201ENSMUST00000139973 543 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb1P63158 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm24477-201ENSMUST00000157438 103 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Ppp1r2-ps9-201ENSMUST00000173100 549 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm6472-201ENSMUST00000178147 651 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm8941-201ENSMUST00000181451 899 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 V1rg10-201ENSMUST00000183378 937 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm27952-201ENSMUST00000184748 105 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm27781-201ENSMUST00000185185 92 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm28997-201ENSMUST00000188759 429 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm28640-201ENSMUST00000190918 550 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm43979-201ENSMUST00000203179 475 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm4874-201ENSMUST00000203589 691 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Rpl7a-ps14-201ENSMUST00000205097 790 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 AC127581.1-201ENSMUST00000214084 771 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm30893-201ENSMUST00000220479 903 ntTSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 AC153662.1-201ENSMUST00000222220 270 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 AC154636.1-201ENSMUST00000223226 126 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 AC173481.1-201ENSMUST00000223351 270 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 AC131178.1-201ENSMUST00000228649 492 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Olfr998-201ENSMUST00000052307 1012 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Olfr1499-201ENSMUST00000055672 1052 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm22684-201ENSMUST00000082849 132 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm23460-201ENSMUST00000083258 109 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Olfr877-201ENSMUST00000086063 936 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Olfr679-201ENSMUST00000098158 952 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Slc6a15-202ENSMUST00000179636 3543 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm19176-201ENSMUST00000222149 1831 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Atf2-207ENSMUST00000112017 2396 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Olfr668-202ENSMUST00000215359 3613 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm11867-201ENSMUST00000133363 1909 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb1P63158 Vmn1r235-201ENSMUST00000060603 1781 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb1P63158 Vmn1r81-205ENSMUST00000228764 13763 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Gm42702-201ENSMUST00000199515 4217 ntBASIC6.03□□□□□ -1.44
Hmgb1P63158 Olfr1016-203ENSMUST00000217410 2738 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Hmgb1P63158 4932438A13Rik-201ENSMUST00000057272 15883 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Hmgb1P63158 Gje1-201ENSMUST00000020016 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
Hmgb1P63158 Dhrs9-201ENSMUST00000063690 4281 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb1P63158 AC154681.1-201ENSMUST00000225876 1735 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Olfr1501-203ENSMUST00000215350 4395 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Hmgb1P63158 Ankar-203ENSMUST00000212573 3952 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm43886-201ENSMUST00000205039 2386 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm43648-201ENSMUST00000197775 2485 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm15095-201ENSMUST00000118996 1430 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm42496-201ENSMUST00000197976 3241 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb1P63158 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Hmgb1P63158 Neurod4-201ENSMUST00000061571 3345 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm26144-201ENSMUST00000104475 132 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Rnf148-201ENSMUST00000104979 1239 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Hmgb1P63158 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm16394-201ENSMUST00000117289 675 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm12568-201ENSMUST00000117362 624 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Hmgb1-ps2-201ENSMUST00000117548 636 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm13379-201ENSMUST00000118053 621 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Hmgb1-ps3-201ENSMUST00000118415 636 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm15387-201ENSMUST00000120421 648 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Xlr5e-ps-201ENSMUST00000122043 711 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm12833-201ENSMUST00000136112 477 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm23280-201ENSMUST00000157905 139 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm16236-201ENSMUST00000159588 379 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm3170-201ENSMUST00000168753 850 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm22655-201ENSMUST00000174949 96 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm3348-201ENSMUST00000177813 850 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Hmgb1-ps9-201ENSMUST00000179479 645 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm28885-201ENSMUST00000185615 563 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm28655-201ENSMUST00000191538 692 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm37164-201ENSMUST00000192809 637 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Trav12-4-201ENSMUST00000200663 271 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Clec2j-202ENSMUST00000203658 606 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm43992-201ENSMUST00000204358 197 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm36864-201ENSMUST00000205530 684 ntAPPRIS ALT2 TSL 3 BASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm30928-202ENSMUST00000206881 271 ntTSL 3 BASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm45069-201ENSMUST00000208604 317 ntTSL 2 BASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm8672-201ENSMUST00000221200 332 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb1P63158 CT025525.1-201ENSMUST00000226325 1054 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 AC137871.2-201ENSMUST00000226482 289 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 AC154738.5-201ENSMUST00000227397 310 ntBASIC6.02□□□□□ -1.45
Hmgb1P63158 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Hmgb1P63158 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms