Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 Gm37044-201ENSMUST00000193531 693 ntBASIC5.4□□□□□ -1.54
LdlrP35951 Gm33819-201ENSMUST00000194008 1221 ntTSL 3 BASIC5.4□□□□□ -1.54
LdlrP35951 Gm38369-201ENSMUST00000195101 693 ntBASIC5.4□□□□□ -1.54
LdlrP35951 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.4□□□□□ -1.54
LdlrP35951 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC5.4□□□□□ -1.54
LdlrP35951 Gm44184-201ENSMUST00000204290 132 ntBASIC5.4□□□□□ -1.54
LdlrP35951 Gm45075-201ENSMUST00000208426 649 ntTSL 3 BASIC5.4□□□□□ -1.54
LdlrP35951 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC5.4□□□□□ -1.54
LdlrP35951 Gm8264-201ENSMUST00000217801 465 ntBASIC5.4□□□□□ -1.54
LdlrP35951 AC119892.1-201ENSMUST00000217997 384 ntTSL 3 BASIC5.4□□□□□ -1.54
LdlrP35951 Rpl17-ps2-201ENSMUST00000218101 532 ntBASIC5.4□□□□□ -1.54
LdlrP35951 Gm6474-201ENSMUST00000223250 699 ntBASIC5.4□□□□□ -1.54
LdlrP35951 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LdlrP35951 AC154506.3-201ENSMUST00000225417 213 ntBASIC5.4□□□□□ -1.54
LdlrP35951 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.4□□□□□ -1.54
LdlrP35951 AC133176.1-201ENSMUST00000226668 219 ntBASIC5.4□□□□□ -1.54
LdlrP35951 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LdlrP35951 AC166369.2-201ENSMUST00000228403 308 ntBASIC5.4□□□□□ -1.54
LdlrP35951 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
LdlrP35951 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LdlrP35951 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
LdlrP35951 Gm25404-201ENSMUST00000082970 107 ntBASIC5.4□□□□□ -1.54
LdlrP35951 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.4□□□□□ -1.54
LdlrP35951 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC5.4□□□□□ -1.55
LdlrP35951 Fat1-203ENSMUST00000189017 14651 ntTSL 5 BASIC5.4□□□□□ -1.55
LdlrP35951 Gm44220-201ENSMUST00000203784 2487 ntBASIC5.4□□□□□ -1.55
LdlrP35951 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LdlrP35951 Gm42798-201ENSMUST00000200853 3972 ntBASIC5.4□□□□□ -1.55
LdlrP35951 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
LdlrP35951 Cpne4-202ENSMUST00000077190 3409 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
LdlrP35951 Npsr1-201ENSMUST00000059650 3791 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LdlrP35951 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
LdlrP35951 Ncoa7-202ENSMUST00000092610 2590 ntTSL 1 (best) BASIC5.4□□□□□ -1.55
LdlrP35951 Zscan4-ps2-201ENSMUST00000091440 2277 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
LdlrP35951 Gm42701-201ENSMUST00000196117 1657 ntBASIC5.4□□□□□ -1.55
LdlrP35951 Gm29730-201ENSMUST00000192986 1396 ntBASIC5.4□□□□□ -1.55
LdlrP35951 Vmn1r173-203ENSMUST00000227987 9233 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
LdlrP35951 AC134917.1-201ENSMUST00000220517 1449 ntBASIC5.4□□□□□ -1.55
LdlrP35951 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.39□□□□□ -1.55
LdlrP35951 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Gm45819-201ENSMUST00000210940 1751 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Tubal3-201ENSMUST00000021639 3096 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LdlrP35951 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Glb1l3-201ENSMUST00000034448 2468 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
LdlrP35951 Olfr1416-202ENSMUST00000214928 4838 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
LdlrP35951 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.39□□□□□ -1.55
LdlrP35951 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LdlrP35951 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LdlrP35951 Gm38128-201ENSMUST00000192085 3250 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Cnot4-207ENSMUST00000202417 3296 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LdlrP35951 Gm43462-201ENSMUST00000200265 3648 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Olfr1115-202ENSMUST00000213513 3604 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
LdlrP35951 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
LdlrP35951 Lingo2-203ENSMUST00000108122 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LdlrP35951 Zfp101-201ENSMUST00000167107 2735 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LdlrP35951 Gm24886-201ENSMUST00000104384 123 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Mir1188-201ENSMUST00000116756 120 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Gm15916-201ENSMUST00000118355 736 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Crem-236ENSMUST00000154715 1167 ntTSL 5 BASIC5.39□□□□□ -1.55
LdlrP35951 Gm22214-201ENSMUST00000157563 172 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Gm25861-201ENSMUST00000158251 109 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Gm15995-201ENSMUST00000159897 574 ntTSL 5 BASIC5.39□□□□□ -1.55
LdlrP35951 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LdlrP35951 Gm18406-201ENSMUST00000185872 669 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Gm18342-201ENSMUST00000186987 694 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Gm2427-201ENSMUST00000189121 881 ntBASIC5.39□□□□□ -1.55
LdlrP35951 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.39□□□□□ -1.55
LdlrP35951 1700006P03Rik-201ENSMUST00000191810 409 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Gm42564-201ENSMUST00000196013 582 ntTSL 5 BASIC5.39□□□□□ -1.55
LdlrP35951 AC120011.1-201ENSMUST00000202147 744 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Gm43227-201ENSMUST00000202239 677 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Gm7825-201ENSMUST00000204046 416 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Gm8039-201ENSMUST00000204758 712 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Gm31510-202ENSMUST00000206795 239 ntTSL 3 BASIC5.39□□□□□ -1.55
LdlrP35951 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC5.39□□□□□ -1.55
LdlrP35951 Gm45777-201ENSMUST00000213009 301 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Rpl26-ps1-201ENSMUST00000213139 426 ntBASIC5.39□□□□□ -1.55
LdlrP35951 AC171206.1-201ENSMUST00000213612 213 ntBASIC5.39□□□□□ -1.55
LdlrP35951 AC183268.2-201ENSMUST00000214513 446 ntBASIC5.39□□□□□ -1.55
LdlrP35951 AC102369.1-201ENSMUST00000218415 373 ntBASIC5.39□□□□□ -1.55
LdlrP35951 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LdlrP35951 AC124408.2-201ENSMUST00000228168 645 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LdlrP35951 Ghrl-201ENSMUST00000064993 527 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
LdlrP35951 Olfr1261-201ENSMUST00000077785 921 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LdlrP35951 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LdlrP35951 Gm23407-201ENSMUST00000082538 91 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Gm22977-201ENSMUST00000082615 107 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Olfr1407-ps1-201ENSMUST00000085885 797 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Krtap31-1-201ENSMUST00000093935 973 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
LdlrP35951 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LdlrP35951 AC124746.1-201ENSMUST00000227535 1300 ntBASIC5.39□□□□□ -1.55
LdlrP35951 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.39□□□□□ -1.55
LdlrP35951 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
LdlrP35951 Cfap97-201ENSMUST00000034048 4619 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LdlrP35951 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LdlrP35951 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
LdlrP35951 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
LdlrP35951 Gm5460-201ENSMUST00000100719 1903 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
LdlrP35951 Sdr16c6-202ENSMUST00000108383 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 65.6 ms