Protein–RNA interactions for Protein: P20040

H-2 class II histocompatibility antigen, E-Q beta chain, mousemouse

Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P20040 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
P20040 Itpa-ps3-201ENSMUST00000119034 395 ntBASIC4.17□□□□□ -1.74
P20040 Gm12041-201ENSMUST00000121606 602 ntBASIC4.17□□□□□ -1.74
P20040 Gm11381-201ENSMUST00000138574 420 ntTSL 5 BASIC4.17□□□□□ -1.74
P20040 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC4.17□□□□□ -1.74
P20040 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC4.17□□□□□ -1.74
P20040 Gm16321-201ENSMUST00000155184 574 ntTSL 3 BASIC4.17□□□□□ -1.74
P20040 Gm22885-201ENSMUST00000157410 107 ntBASIC4.17□□□□□ -1.74
P20040 Gm25603-201ENSMUST00000158361 105 ntBASIC4.17□□□□□ -1.74
P20040 Gm20674-201ENSMUST00000177452 369 ntBASIC4.17□□□□□ -1.74
P20040 Gm21241-201ENSMUST00000179551 934 ntBASIC4.17□□□□□ -1.74
P20040 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC4.17□□□□□ -1.74
P20040 Prl8a6-201ENSMUST00000018392 900 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 Gm29582-201ENSMUST00000185667 931 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 1700054K19Rik-201ENSMUST00000186102 452 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 Gm20838-202ENSMUST00000187712 931 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 1700040F15Rik-201ENSMUST00000188244 931 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 Gm21996-201ENSMUST00000188269 931 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 Gm21256-202ENSMUST00000188881 932 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 Gm21739-202ENSMUST00000188917 933 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
P20040 Gm28891-202ENSMUST00000189333 927 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 Gm21094-202ENSMUST00000189577 926 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 Gm20792-201ENSMUST00000189765 931 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 Gm28919-201ENSMUST00000190026 920 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 4930440C22Rik-202ENSMUST00000190754 512 ntTSL 3 BASIC4.17□□□□□ -1.74
P20040 Gm21861-202ENSMUST00000190806 931 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 Gm20819-201ENSMUST00000191091 925 ntBASIC4.17□□□□□ -1.74
P20040 Gm20871-201ENSMUST00000191322 931 ntBASIC4.17□□□□□ -1.74
P20040 Gm21865-202ENSMUST00000191443 923 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 Gm30737-201ENSMUST00000192683 923 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 Gm35134-201ENSMUST00000194086 923 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.17□□□□□ -1.74
P20040 Gm42502-201ENSMUST00000198550 1089 ntBASIC4.17□□□□□ -1.74
P20040 Olfr202-202ENSMUST00000201687 1232 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
P20040 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC4.17□□□□□ -1.74
P20040 Gm43968-201ENSMUST00000203388 389 ntBASIC4.17□□□□□ -1.74
P20040 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.17□□□□□ -1.74
P20040 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC4.17□□□□□ -1.74
P20040 Gm44515-201ENSMUST00000209045 379 ntTSL 5 BASIC4.17□□□□□ -1.74
P20040 Gm3816-201ENSMUST00000209803 433 ntBASIC4.17□□□□□ -1.74
P20040 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
P20040 9530050K03Rik-201ENSMUST00000221663 1299 ntBASIC4.17□□□□□ -1.74
P20040 Gm5457-201ENSMUST00000022260 333 ntBASIC4.17□□□□□ -1.74
P20040 AC125543.1-201ENSMUST00000222778 101 ntBASIC4.17□□□□□ -1.74
P20040 Enkur-201ENSMUST00000027992 1199 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 Olfr480-201ENSMUST00000071658 1029 ntBASIC4.17□□□□□ -1.74
P20040 Vmn1r49-201ENSMUST00000071865 933 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
P20040 Gm6177-201ENSMUST00000085589 465 ntBASIC4.17□□□□□ -1.74
P20040 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC4.17□□□□□ -1.74
P20040 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.17□□□□□ -1.74
P20040 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4.17□□□□□ -1.74
P20040 Gm26814-201ENSMUST00000181178 4149 ntBASIC4.17□□□□□ -1.74
P20040 AC139218.1-201ENSMUST00000228215 4287 ntBASIC4.17□□□□□ -1.74
P20040 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
P20040 Ncoa7-207ENSMUST00000215740 7043 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
P20040 Trim12c-201ENSMUST00000059037 3740 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
P20040 Olfr145-202ENSMUST00000213688 6691 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
P20040 Trim30e-ps1-201ENSMUST00000147064 1890 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
P20040 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4.16□□□□□ -1.74
P20040 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC4.16□□□□□ -1.74
P20040 Cybb-201ENSMUST00000015484 4752 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
P20040 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
P20040 Tmco2-201ENSMUST00000106268 719 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
P20040 Gm23879-201ENSMUST00000116874 126 ntBASIC4.16□□□□□ -1.74
P20040 Gm15297-201ENSMUST00000117795 290 ntBASIC4.16□□□□□ -1.74
P20040 Gm15530-201ENSMUST00000122206 555 ntBASIC4.16□□□□□ -1.74
P20040 Gm568-201ENSMUST00000135777 506 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
P20040 1700003G18Rik-202ENSMUST00000150518 312 ntTSL 3 BASIC4.16□□□□□ -1.74
P20040 Gm23673-201ENSMUST00000157474 298 ntBASIC4.16□□□□□ -1.74
P20040 Gm23513-201ENSMUST00000158181 133 ntBASIC4.16□□□□□ -1.74
P20040 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
P20040 4930445B16Rik-201ENSMUST00000170085 1123 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
P20040 Gm8214-201ENSMUST00000172123 351 ntBASIC4.16□□□□□ -1.74
P20040 Gm27202-201ENSMUST00000183838 512 ntTSL 5 BASIC4.16□□□□□ -1.74
P20040 Il3-201ENSMUST00000019058 629 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
P20040 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC4.16□□□□□ -1.74
P20040 Gm10292-202ENSMUST00000193165 585 ntBASIC4.16□□□□□ -1.74
P20040 Gm44403-201ENSMUST00000198554 129 ntBASIC4.16□□□□□ -1.74
P20040 Gm43005-201ENSMUST00000199015 648 ntBASIC4.16□□□□□ -1.74
P20040 Gm44876-201ENSMUST00000205394 670 ntTSL 3 BASIC4.16□□□□□ -1.74
P20040 Rpl18a-205ENSMUST00000212494 473 ntTSL 5 BASIC4.16□□□□□ -1.74
P20040 Gm7333-201ENSMUST00000213449 1060 ntBASIC4.16□□□□□ -1.74
P20040 4930405J17Rik-201ENSMUST00000214323 620 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
P20040 Gm32171-201ENSMUST00000217419 1043 ntTSL 5 BASIC4.16□□□□□ -1.74
P20040 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.16□□□□□ -1.74
P20040 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.16□□□□□ -1.74
P20040 AC162376.1-201ENSMUST00000220120 435 ntBASIC4.16□□□□□ -1.74
P20040 AC127279.1-201ENSMUST00000220140 637 ntBASIC4.16□□□□□ -1.74
P20040 Rpl29-ps2-202ENSMUST00000220540 1165 ntTSL 5 BASIC4.16□□□□□ -1.74
P20040 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.16□□□□□ -1.74
P20040 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC4.16□□□□□ -1.74
P20040 AC106830.1-201ENSMUST00000228032 1003 ntBASIC4.16□□□□□ -1.74
P20040 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
P20040 Olfr346-201ENSMUST00000078854 930 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
P20040 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
P20040 Gm6065-201ENSMUST00000081336 492 ntBASIC4.16□□□□□ -1.74
P20040 Mir504-201ENSMUST00000093602 79 ntBASIC4.16□□□□□ -1.74
P20040 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 79.6 ms