Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm13363-201ENSMUST00000122008 522 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Olfr1027-ps1-201ENSMUST00000122338 875 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm14905-201ENSMUST00000122351 639 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm22345-201ENSMUST00000122644 107 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm12519-201ENSMUST00000134099 693 ntTSL 5 BASIC4.95□□□□□ -1.62
Lire1P11260 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Lire1P11260 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC4.95□□□□□ -1.62
Lire1P11260 Gm23537-201ENSMUST00000157536 330 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm26170-201ENSMUST00000158419 148 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm6245-201ENSMUST00000164699 768 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm17142-201ENSMUST00000164933 645 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm6650-201ENSMUST00000166710 614 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm4831-201ENSMUST00000174626 594 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm26970-201ENSMUST00000182990 964 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm37932-201ENSMUST00000192258 1167 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm32051-201ENSMUST00000196818 709 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Lire1P11260 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Lire1P11260 Gm4501-201ENSMUST00000207330 551 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm4558-201ENSMUST00000207886 521 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm4528-201ENSMUST00000207905 551 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC4.95□□□□□ -1.62
Lire1P11260 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC4.95□□□□□ -1.62
Lire1P11260 AC154636.1-201ENSMUST00000223226 126 ntBASIC4.95□□□□□ -1.62
Lire1P11260 AC154730.1-201ENSMUST00000227874 816 ntBASIC4.95□□□□□ -1.62
Lire1P11260 4933400A11Rik-202ENSMUST00000068894 1217 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Lire1P11260 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
Lire1P11260 Eya4-201ENSMUST00000074366 3488 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
Lire1P11260 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
Lire1P11260 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Lire1P11260 Nlrp4f-204ENSMUST00000221659 3551 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Lire1P11260 Gm37674-201ENSMUST00000194177 1834 ntBASIC4.95□□□□□ -1.62
Lire1P11260 Olfr1290-204ENSMUST00000217611 2729 ntAPPRIS P1 TSL 3 BASIC4.95□□□□□ -1.62
Lire1P11260 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
Lire1P11260 Lcor-202ENSMUST00000163929 4663 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Lire1P11260 Gm10933-201ENSMUST00000221891 1861 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Mef2c-201ENSMUST00000005722 6217 ntTSL 5 BASIC4.94□□□□□ -1.62
Lire1P11260 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Lire1P11260 Igkv1-131-201ENSMUST00000103306 362 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Lire1P11260 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Lire1P11260 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC4.94□□□□□ -1.62
Lire1P11260 Gm11561-201ENSMUST00000117429 417 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Gm11843-201ENSMUST00000118984 425 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Gm15741-201ENSMUST00000119401 754 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Gm15166-201ENSMUST00000120790 385 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Gm11376-201ENSMUST00000144541 231 ntTSL 5 BASIC4.94□□□□□ -1.62
Lire1P11260 Gm26312-201ENSMUST00000157769 165 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Gm22312-201ENSMUST00000158005 130 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Gm25861-201ENSMUST00000158251 109 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Gm10269-201ENSMUST00000165229 372 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Lire1P11260 Gm3216-201ENSMUST00000166927 486 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Stx5a-215ENSMUST00000176570 563 ntTSL 2 BASIC4.94□□□□□ -1.62
Lire1P11260 Gm18177-201ENSMUST00000188373 404 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Ccl12-201ENSMUST00000000194 537 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Lire1P11260 Gm43078-201ENSMUST00000197222 168 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Mir6994-201ENSMUST00000198985 73 ntBASIC4.94□□□□□ -1.62
Lire1P11260 4930443G03Rik-201ENSMUST00000203475 1282 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Gm44048-201ENSMUST00000204531 361 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Gm9278-201ENSMUST00000205508 553 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC4.94□□□□□ -1.62
Lire1P11260 Gm45660-201ENSMUST00000210267 151 ntBASIC4.94□□□□□ -1.62
Lire1P11260 AC069561.4-201ENSMUST00000215291 572 ntAPPRIS P1 TSL 3 BASIC4.94□□□□□ -1.62
Lire1P11260 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC4.94□□□□□ -1.62
Lire1P11260 AC127337.1-201ENSMUST00000220423 625 ntTSL 2 BASIC4.94□□□□□ -1.62
Lire1P11260 AL807824.1-201ENSMUST00000223151 183 ntBASIC4.94□□□□□ -1.62
Lire1P11260 AL607142.1-201ENSMUST00000226560 78 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Lire1P11260 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Cst9-201ENSMUST00000028935 687 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Lire1P11260 Wfdc15a-201ENSMUST00000063251 488 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Lire1P11260 Vmn1r46-201ENSMUST00000075797 930 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
Lire1P11260 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Gm43886-201ENSMUST00000205039 2386 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.94□□□□□ -1.62
Lire1P11260 Olfr1484-202ENSMUST00000208104 3621 ntTSL 2 BASIC4.94□□□□□ -1.62
Lire1P11260 Olfr1484-206ENSMUST00000217451 3628 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Lire1P11260 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Lire1P11260 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC4.94□□□□□ -1.62
Lire1P11260 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
Lire1P11260 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
Lire1P11260 Gprc6a-202ENSMUST00000218684 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
Lire1P11260 Gm12633-201ENSMUST00000117742 1705 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Lire1P11260 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Lire1P11260 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
Lire1P11260 Gm7416-201ENSMUST00000117448 1487 ntBASIC4.94□□□□□ -1.62
Lire1P11260 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Lire1P11260 Rgs21-202ENSMUST00000184189 1674 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
Lire1P11260 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Lire1P11260 Far1-202ENSMUST00000067929 4935 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
Lire1P11260 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Lire1P11260 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Lire1P11260 Btbd35f14-201ENSMUST00000105117 1701 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
Lire1P11260 Hspb11-202ENSMUST00000106749 607 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Lire1P11260 Svs3a-202ENSMUST00000109370 1195 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
Lire1P11260 Gm23839-201ENSMUST00000116957 109 ntBASIC4.93□□□□□ -1.62
Lire1P11260 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
Lire1P11260 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC4.93□□□□□ -1.62
Lire1P11260 Gm4222-201ENSMUST00000165784 470 ntBASIC4.93□□□□□ -1.62
Retrieved 100 of 76,532 protein–RNA pairs in 77.6 ms