Protein–RNA interactions for Protein: P0C0A3

Chmp6, Charged multivesicular body protein 6, mousemouse

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp6P0C0A3 Gm12062-201ENSMUST00000117533 259 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Vmn1r-ps99-201ENSMUST00000120067 766 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm11910-201ENSMUST00000121624 432 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm24251-201ENSMUST00000157324 114 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm20618-202ENSMUST00000177482 1227 ntTSL 3 BASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm16378-201ENSMUST00000179168 342 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm2950-201ENSMUST00000185530 520 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm28503-201ENSMUST00000185966 147 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm29086-201ENSMUST00000186774 222 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm29085-201ENSMUST00000187108 225 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm43828-201ENSMUST00000196890 639 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm19596-201ENSMUST00000203685 739 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm44296-201ENSMUST00000204689 681 ntTSL 3 BASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm44237-201ENSMUST00000205183 936 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm45610-201ENSMUST00000209227 784 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 AC156832.3-201ENSMUST00000215591 435 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm35326-201ENSMUST00000218234 1041 ntTSL 5 BASIC4.99□□□□□ -1.61
Chmp6P0C0A3 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Olfr135-201ENSMUST00000076245 1079 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm24031-201ENSMUST00000083930 131 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm38152-201ENSMUST00000195389 3566 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Zfp287-201ENSMUST00000005399 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Mbnl1-219ENSMUST00000194201 4319 ntTSL 5 BASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Gm44668-201ENSMUST00000207911 3265 ntBASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Chmp6P0C0A3 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Chmp6P0C0A3 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Mlip-205ENSMUST00000183955 3069 ntAPPRIS P5 TSL 5 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 4930402F11Rik-204ENSMUST00000208612 1405 ntTSL 5 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 6720489N17Rik-202ENSMUST00000201563 2640 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Vmn1r200-202ENSMUST00000226157 5505 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Gm23014-201ENSMUST00000104144 130 ntBASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Gm17152-201ENSMUST00000172430 535 ntBASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Gm26950-201ENSMUST00000182734 498 ntBASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Gm4412-201ENSMUST00000186660 433 ntBASIC4.98□□□□□ -1.61
Chmp6P0C0A3 1700013M08Rik-201ENSMUST00000197709 683 ntTSL 3 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC4.98□□□□□ -1.61
Chmp6P0C0A3 AC120011.1-201ENSMUST00000202147 744 ntBASIC4.98□□□□□ -1.61
Chmp6P0C0A3 4922502N22Rik-201ENSMUST00000204038 1149 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Gm44138-201ENSMUST00000204939 271 ntBASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Ceacam-ps1-202ENSMUST00000206683 630 ntBASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Gm38843-201ENSMUST00000209189 323 ntTSL 5 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 AC132384.6-201ENSMUST00000218976 1206 ntBASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Gm7045-201ENSMUST00000221466 605 ntBASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.98□□□□□ -1.61
Chmp6P0C0A3 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Ms4a2-201ENSMUST00000025583 1211 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Olfr957-201ENSMUST00000051653 936 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Xlr5c-201ENSMUST00000088450 540 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 n-R5s152-201ENSMUST00000093641 119 ntBASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Gm18189-201ENSMUST00000218153 1951 ntBASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Gm2099-202ENSMUST00000223310 3341 ntBASIC4.98□□□□□ -1.61
Chmp6P0C0A3 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Chmp6P0C0A3 AC151904.4-201ENSMUST00000219868 1319 ntBASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Olfr1176-202ENSMUST00000213778 2823 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm37696-201ENSMUST00000194223 3349 ntBASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Med14-203ENSMUST00000115481 3729 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Cyld-204ENSMUST00000209206 4032 ntTSL 5 BASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Neat1-201ENSMUST00000173672 20771 ntBASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Fcrl5-201ENSMUST00000049926 1791 ntAPPRIS P4 TSL 5 BASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm12237-201ENSMUST00000120158 470 ntBASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm24675-201ENSMUST00000158757 259 ntBASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm27036-201ENSMUST00000182465 980 ntBASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm8069-201ENSMUST00000197887 154 ntBASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm43015-201ENSMUST00000199087 565 ntBASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm17766-201ENSMUST00000209223 442 ntBASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm21112-201ENSMUST00000212224 578 ntBASIC4.97□□□□□ -1.61
Chmp6P0C0A3 Gm7760-201ENSMUST00000212265 578 ntBASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 82.3 ms