Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm11584-201ENSMUST00000120636 325 ntBASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm6619-201ENSMUST00000159229 608 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Vmn1r94-201ENSMUST00000164526 918 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm4216-201ENSMUST00000168926 918 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Vmn1r142-201ENSMUST00000169697 918 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm8599-201ENSMUST00000193033 457 ntBASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm44474-201ENSMUST00000196525 127 ntBASIC4.31□□□□□ -1.72
Cx3cl1O35188 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm43828-201ENSMUST00000196890 639 ntBASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm3148-201ENSMUST00000203594 612 ntBASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm38825-201ENSMUST00000204022 648 ntTSL 5 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm31897-201ENSMUST00000205924 340 ntTSL 5 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm17766-201ENSMUST00000209223 442 ntBASIC4.31□□□□□ -1.72
Cx3cl1O35188 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm18442-201ENSMUST00000220925 639 ntBASIC4.31□□□□□ -1.72
Cx3cl1O35188 Olfr690-201ENSMUST00000061920 1062 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Uts2b-201ENSMUST00000070531 835 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Cx3cl1O35188 5430401F13Rik-201ENSMUST00000075020 602 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.31□□□□□ -1.72
Cx3cl1O35188 Olfr206-201ENSMUST00000084791 1005 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 AC113059.3-201ENSMUST00000217423 2777 ntBASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm15170-201ENSMUST00000121593 2023 ntBASIC4.31□□□□□ -1.72
Cx3cl1O35188 Gm42986-201ENSMUST00000201618 3385 ntBASIC4.31□□□□□ -1.72
Cx3cl1O35188 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Olfr944-203ENSMUST00000215306 1523 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Cx3cl1O35188 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Cd84-205ENSMUST00000155802 3291 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm22498-201ENSMUST00000104497 86 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm15779-201ENSMUST00000117470 412 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm12520-201ENSMUST00000117493 316 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm14516-201ENSMUST00000120012 252 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm14716-201ENSMUST00000120138 718 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm12237-201ENSMUST00000120158 470 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm13932-201ENSMUST00000120873 610 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm13174-201ENSMUST00000126141 220 ntTSL 3 BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm12909-201ENSMUST00000134190 620 ntTSL 2 BASIC4.3□□□□□ -1.72
Cx3cl1O35188 4930440I19Rik-201ENSMUST00000144728 992 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm24689-201ENSMUST00000157760 104 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm23799-201ENSMUST00000175559 120 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 4933440J02Rik-201ENSMUST00000181547 1144 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm27387-201ENSMUST00000184583 116 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm2950-201ENSMUST00000185530 520 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm23925-202ENSMUST00000188429 132 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm37359-201ENSMUST00000195243 526 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm42927-201ENSMUST00000200624 3841 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm29793-201ENSMUST00000202874 460 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm44779-201ENSMUST00000206937 708 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm20586-201ENSMUST00000210122 547 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 AC105169.1-201ENSMUST00000218912 1294 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Aoah-202ENSMUST00000221982 919 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
Cx3cl1O35188 AC116589.3-201ENSMUST00000223034 1165 ntTSL 5 BASIC4.3□□□□□ -1.72
Cx3cl1O35188 n-R5s168-201ENSMUST00000083948 104 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cx3cl1O35188 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Klhl15-204ENSMUST00000113915 6241 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.3□□□□□ -1.72
Cx3cl1O35188 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
Cx3cl1O35188 Fzd3-202ENSMUST00000131309 12734 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cx3cl1O35188 Ankrd28-204ENSMUST00000227089 3522 ntBASIC4.29□□□□□ -1.72
Cx3cl1O35188 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
Cx3cl1O35188 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cx3cl1O35188 C430019N01Rik-201ENSMUST00000199517 1567 ntBASIC4.29□□□□□ -1.72
Cx3cl1O35188 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm12261-201ENSMUST00000117499 645 ntBASIC4.29□□□□□ -1.72
Cx3cl1O35188 Fabp12-202ENSMUST00000117917 648 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cx3cl1O35188 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm15166-201ENSMUST00000120790 385 ntBASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm12731-201ENSMUST00000120932 268 ntBASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm13745-201ENSMUST00000121994 527 ntBASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm12974-201ENSMUST00000129875 333 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm15738-201ENSMUST00000131985 275 ntTSL 5 BASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm13632-201ENSMUST00000150119 384 ntTSL 5 BASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm17046-201ENSMUST00000168078 850 ntBASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm22177-201ENSMUST00000175002 158 ntBASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm38046-201ENSMUST00000192733 550 ntBASIC4.29□□□□□ -1.72
Cx3cl1O35188 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm8458-201ENSMUST00000196658 819 ntBASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm8069-201ENSMUST00000197887 154 ntBASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm43786-201ENSMUST00000201722 524 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
Cx3cl1O35188 Gm45610-201ENSMUST00000209227 784 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms